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Gene set: BRCA_UP_WELCSH (C2:PERT:0023)
Standard nameBRCA_UP_WELCSH
Systematic nameC2:PERT:0023
Brief descriptionGenes upregulated by BRCA1
CategoryC2: Curated
Sub-categoryPERT: Experimental pertuberation
Full description or Abstract

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Loss of function of BRCA1 caused by inherited mutation and tissue-specific
somatic mutation leads to breast and ovarian cancer. Nearly all
BRCA1 germ-line mutations involve truncation or loss of the C-terminal
BRCT transcriptional activation domain, suggesting that transcriptional
regulation is a critical function of the wild-type gene. The purpose
of this project was to determine whether there is a link between
the role of BRCA1 in transcriptional regulation and its role in
tumor suppression. We developed a cell line (in which BRCA1 can
be induced) and used microarray analysis to compare transcription
profiles of epithelial cells with low endogenous levels of BRCA1
vs. transcription profiles of cells with 2-4-fold higher induced
levels of expression of BRCA1. At these levels of expression,
BRCA1 did not induce apoptosis. Undirected cluster analysis of
six paired experiments revealed 373 genes, the expression of which
was altered significantly and consistently by BRCA1 induction.
Expression of 62 genes was altered more than 2-fold. BRCA1-regulated
genes associated with breast tumorigenesis included the estrogen-responsive
genes MYC and cyclin D1, which are overexpressed in many breast
tumors; STAT1 and JAK1, key components of the cytokine signal
transduction pathway; the extracellular matrix protein laminin
3A; ID4, an inhibitor of DNA-binding transcriptional activators,
which in turn negatively regulates BRCA1 expression; and the prohormone
stanniocalcin, expression of which is lost in breast tumor cells.
Coordinated expression of BRCA1 with ID4 and with stanniocalcin
was confirmed in primary breast and ovarian tumors. 
Publication URL12032322
External linksna
Keywords & MeSH headingsNeoplastic,Breast Neoplasms,Mutation,P.H.S.,Transfection,Cell Transformation,Human,Support,Complementary/genetics,Epithelial Cells/cytology/physiology,analogs & derivatives,Genes,genetics,BRCA1,Kidney,Cell Division/genetics,Breast/cytology/physiology,Cell Line,DNA,Female,pharmacology,Gene Expression Regulation/drug effects,Ovarian Neoplasms/genetics,Molecular,Kinetics,Ecdysterone,Gene Expression Regulation,Cloning
OrganismHuman
Contributed byBroad Institute
Source platformHu6800
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Genes

42 genes, 42 accessions (Toggle view)

AccessionGeneTitleLinks
RDX
VAMP3
ID4
TITF1
IL16
STC1
CITED2
COP9
SERPINB1
CLTB
SEC23A
PPP1R1A
WRB
MAP2K1
FSTL1
TSNAX
NFYC
ZNF138
KIF2
PBP
ENPP2
KCNK1
H1F0
P2RX1
ZNF148
CALD1
GALNT3
APP
HTATIP
JAK1
STAT1
LAMA3
MGAT2
CCNG2
RRM2
IDH1
LIMS1
ADD1
SEPP1
LIPA
TFPI2
EXTL2


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