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Gene set: HYPOXIA_DOWN_MANALO (C2:PERT:0101)
Standard nameHYPOXIA_DOWN_MANALO
Systematic nameC2:PERT:0101
Brief descriptionGenes downregulated in human pulmonary endothelial cells under hypoxic conditions or after exposure to AdCA5, an adenovirus carrying constitutively active hypoxia-inducible factor 1 (HIF-1alpha).
CategoryC2: Curated
Sub-categoryPERT: Experimental pertuberation
Full description or Abstract
Hypoxia-inducible factor 1 (HIF-1) activates transcription of
genes encoding angiogenic growth factors, which are secreted by
hypoxic cells and stimulate endothelial cells, leading to angiogenesis.
To determine whether HIF-1 also mediates cell-autonomous responses
to hypoxia, we have compared gene expression profiles in arterial
endothelial cells cultured under nonhypoxic versus hypoxic conditions
and in nonhypoxic cells infected with adenovirus encoding beta-galactosidase
versus a constitutively active form of HIF-1alpha (AdCA5). There
were 245 gene probes that showed at least 1.5-fold increase in
expression in response to hypoxia and in response to AdCA5; 325
gene probes showed at least 1.5-fold decrease in expression in
response to hypoxia and in response to AdCA5. The largest category
of genes down-regulated by both hypoxia and AdCA5 encoded proteins
involved in cell growth/proliferation. Many genes up-regulated
by both hypoxia and AdCA5 encoded cytokines/growth factors, receptors,
and other signaling proteins. Transcription factors accounted
for the largest group of HIF-1-regulated genes, indicating that
HIF-1 controls a network of transcriptional responses to hypoxia
in endothelial cells. Infection of endothelial cells with AdCA5
under nonhypoxic conditions was sufficient to induce increased
basement membrane invasion and tube formation similar to the responses
induced by hypoxia, indicating that HIF-1 mediates cell-autonomous
activation of endothelial cells. 
Publication URL15374877
External linksna
Keywords & MeSH headingsVascular,Oligonucleotide Array Sequence Analysis,P.H.S.,Pulmonary Artery/cytology,Endothelium,Anoxia,Humans,genetics,Mutagenesis,Trans-Activation (Genetics)/physiology,Transcription Factors,cytology,physiology,physiopathology,Endothelial Cells/physiology
OrganismHuman
Contributed byKate Stafford
Source platformGene_Symbol
Downloadgrp|xml|map
Genes

91 genes, 91 accessions (Toggle view)

GeneTitleLinks
SNRPD1Small nuclear ribonucleoprotein D1 polypeptide 16kDaSource|GeneCards
DDX23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23Source|GeneCards
PRC1protein regulator of cytokinesis 1Source|GeneCards
MAD2L1MAD2 mitotic arrest deficient-like 1 (yeast)Source|GeneCards
SNAPC5small nuclear RNA activating complex, polypeptide 5, 19kDaSource|GeneCards
NOL5Anucleolar protein 5A (56kDa with KKE/D repeat)Source|GeneCards
USP1ubiquitin specific protease 1Source|GeneCards
USP39ubiquitin specific protease 39Source|GeneCards
RNU3IP2RNA, U3 small nucleolar interacting protein 2Source|GeneCards
MCM5MCM5 minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae)Source|GeneCards
PSMD11proteasome (prosome, macropain) 26S subunit, non-ATPase, 11Source|GeneCards
POLD2polymerase (DNA directed), delta 2, regulatory subunit 50kDaSource|GeneCards
PA2G4proliferation-associated 2G4, 38kDaSource|GeneCards
ASKactivator of S phase kinaseSource|GeneCards
MAZMYC-associated zinc finger protein (purine-binding transcription factor)Source|GeneCards
MLLT10myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10Source|GeneCards
GTPBP4GTP binding protein 4Source|GeneCards
MCM6MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae)Source|GeneCards
BRCA1breast cancer 1, early onsetSource|GeneCards
POLE2polymerase (DNA directed), epsilon 2 (p59 subunit)Source|GeneCards
TRIP13thyroid hormone receptor interactor 13Source|GeneCards
CDC6CDC6 cell division cycle 6 homolog (S. cerevisiae)Source|GeneCards
BOP1block of proliferation 1Source|GeneCards
MPHOSPH9M-phase phosphoprotein 9Source|GeneCards
RRS1RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)Source|GeneCards
MRPS12mitochondrial ribosomal protein S12Source|GeneCards
DDX18DEAD (Asp-Glu-Ala-Asp) box polypeptide 18Source|GeneCards
ORC6Lorigin recognition complex, subunit 6 homolog-like (yeast)Source|GeneCards
RPP30ribonuclease P (30kD)Source|GeneCards
MCM4MCM4 minichromosome maintenance deficient 4 (S. cerevisiae)Source|GeneCards
RRM1ribonucleotide reductase M1 polypeptideSource|GeneCards
PPARDperoxisome proliferative activated receptor, deltaSource|GeneCards
DHX35DEAH (Asp-Glu-Ala-His) box polypeptide 35Source|GeneCards
CCNE1cyclin E1Source|GeneCards
ID1inhibitor of DNA binding 1, dominant negative helix-loop-helix proteinSource|GeneCards
NOLC1nucleolar and coiled-body phosphoprotein 1Source|GeneCards
HNRPUheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)Source|GeneCards
DNA2LDNA2 DNA replication helicase 2-like (yeast)Source|GeneCards
SNRPD3small nuclear ribonucleoprotein D3 polypeptide 18kDaSource|GeneCards
RRM2ribonucleotide reductase M2 polypeptideSource|GeneCards
DHFRdihydrofolate reductaseSource|GeneCards
SNRPA1small nuclear ribonucleoprotein polypeptide A'Source|GeneCards
ILF3interleukin enhancer binding factor 3, 90kDaSource|GeneCards
DDX11DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)Source|GeneCards
CCNE2cyclin E2Source|GeneCards
UBE2Subiquitin-conjugating enzyme E2SSource|GeneCards
POLGpolymerase (DNA directed), gammaSource|GeneCards
TFAMtranscription factor A, mitochondrialSource|GeneCards
MCM2MCM2 minichromosome maintenance deficient 2, mitotin (S. cerevisiae)Source|GeneCards
POLR3Kpolymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDaSource|GeneCards
HNRPDLheterogeneous nuclear ribonucleoprotein D-likeSource|GeneCards
MRPL46mitochondrial ribosomal protein L46Source|GeneCards
UCHL5ubiquitin carboxyl-terminal hydrolase L5Source|GeneCards
RPL39ribosomal protein L39Source|GeneCards
MCM3MCM3 minichromosome maintenance deficient 3 (S. cerevisiae)Source|GeneCards
ATIC5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolaseSource|GeneCards
CHAF1Achromatin assembly factor 1, subunit A (p150)Source|GeneCards
RFC2replication factor C (activator 1) 2, 40kDaSource|GeneCards
UMPSuridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase)Source|GeneCards
RFC3replication factor C (activator 1) 3, 38kDaSource|GeneCards
PFS2DNA replication complex GINS protein PSF2Source|GeneCards
MFN2mitofusin 2Source|GeneCards
PSME3proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)Source|GeneCards
MRPL40mitochondrial ribosomal protein L40Source|GeneCards
CTPSCTP synthaseSource|GeneCards
SKP2S-phase kinase-associated protein 2 (p45)Source|GeneCards
MCM10MCM10 minichromosome maintenance deficient 10 (S. cerevisiae)Source|GeneCards
ZNF500zinc finger protein 500Source|GeneCards
HNRPDheterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)Source|GeneCards
TSFMTs translation elongation factor, mitochondrialSource|GeneCards
PSME4proteasome (prosome, macropain) activator subunit 4Source|GeneCards
RFC5replication factor C (activator 1) 5, 36.5kDaSource|GeneCards
PRPS1phosphoribosyl pyrophosphate synthetase 1Source|GeneCards
CCNFcyclin FSource|GeneCards
CDC2cell division cycle 2, G1 to S and G2 to MSource|GeneCards
CDC7CDC7 cell division cycle 7 (S. cerevisiae)Source|GeneCards
BARD1BRCA1 associated RING domain 1Source|GeneCards
ZWINTZW10 interactorSource|GeneCards
SFRS2splicing factor, arginine/serine-rich 2Source|GeneCards
NEK4NIMA (never in mitosis gene a)-related kinase 4Source|GeneCards
RB1retinoblastoma 1 (including osteosarcoma)Source|GeneCards
DDX21DEAD (Asp-Glu-Ala-Asp) box polypeptide 21Source|GeneCards
ELK1ELK1, member of ETS oncogene familySource|GeneCards


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