[an error occurred while processing this directive]
Gene set: V$HFH1_01 (C3:TFAC:0079)
Standard nameV$HFH1_01
Systematic nameC3:TFAC:0079
Brief descriptionGenes with 3'UTR containing motif NATTGTTTATWT which matches annotation for FOXQ1: forkhead box Q1
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract
XX
XX
XX
FA HFH-1
XX
SY HNF-3/Fkh Homolog 1; HFH1.
XX
OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
XX
CL C0023; fork head.
XX
SZ 439 AA; 45.5 kDa (cDNA)
XX
XX
SC SwissProt #Q63244
XX
FT 98 199 fork head domain.
FT 98 189 SM00339; FH.
FT 100 196 PF00250; Fork_head.
FT 127 146 contributes to DNA binding specificity.
XX
CP low level expression in kidney, lung [3]
CN brain, heart, intestine, liver, spleen [3]
XX
XX
XX
XX
RN [1]; RE0006655.
RA TRANSFAC_Team.
RT Revisions of transcription factor domains
RL TRANSFAC Reports 1:0002 (1998).
RN [2]; RE0003012.
RX MEDLINE; 94187745.
RA Overdier D. G., Porcella A., Costa R. H.
RT The DNA-binding specificity of the hepatocyte nuclear factor 3/forkhead
RT domain is influenced by amino acid residues adjacent to the recognition
RT helix
RL Mol. Cell. Biol. 14:2755-2766 (1994).
RN [3]; RE0006381.
RX MEDLINE; 93248207.
RA Clevidence D. E., Overdier D. G., Tao W., Qian X., Pani L., Lai E., Costa
RA R. H.
RT Identification of nine tissue-specific transcription factors of the
RT hepatocyte nuclear factor 3/forkhead DNA-binding-domain family
RL Proc. Natl. Acad. Sci. USA 90:3948-3952 (1993).
XX
Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

256 genes, 256 accessions (Toggle view)

AccessionGeneTitleLinks
MSI2MSI2musashi homolog 2 (Drosophila)Source|GeneCards
TM4SF10TM4SF10transmembrane 4 superfamily member 10Source|GeneCards
KCTD12KCTD12potassium channel tetramerisation domain containing 12Source|GeneCards
LMO4LMO4LIM domain only 4Source|GeneCards
SUMO4SUMO4SMT3 suppressor of mif two 3 homolog 4 (yeast)Source|GeneCards
SUMO1SUMO1SMT3 suppressor of mif two 3 homolog 1 (yeast)Source|GeneCards
RREB1RREB1ras responsive element binding protein 1Source|GeneCards
BCL11BBCL11BB-cell CLL/lymphoma 11B (zinc finger protein)Source|GeneCards
RAD21RAD21RAD21 homolog (S. pombe)Source|GeneCards
FOXD3FOXD3forkhead box D3Source|GeneCards
ISG20ISG20interferon stimulated gene 20kDaSource|GeneCards
IL17EIL17Einterleukin 17ESource|GeneCards
CYLN2CYLN2cytoplasmic linker 2Source|GeneCards
NTF3NTF3neurotrophin 3Source|GeneCards
HESX1HESX1homeo box (expressed in ES cells) 1Source|GeneCards
CSNK1G3CSNK1G3casein kinase 1, gamma 3Source|GeneCards
RPS6KB1RPS6KB1ribosomal protein S6 kinase, 70kDa, polypeptide 1Source|GeneCards
BHC80PHF21APHD finger protein 21ASource|GeneCards
PIM1PIM1pim-1 oncogeneSource|GeneCards
NRP1NRP1Neuropilin 1Source|GeneCards
BUB3BUB3BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)Source|GeneCards
PPP2R3APPP2R3Aprotein phosphatase 2 (formerly 2A), regulatory subunit B'', alphaSource|GeneCards
GOLGA1GOLGA1golgi autoantigen, golgin subfamily a, 1Source|GeneCards
FLJ33814FLJ33814hypothetical protein FLJ33814Source|GeneCards
PITX2PITX2paired-like homeodomain transcription factor 2Source|GeneCards
PIK3C2APIK3C2Aphosphoinositide-3-kinase, class 2, alpha polypeptideSource|GeneCards
LOC138046LOC138046hypothetical protein LOC138046Source|GeneCards
TAF10TAF10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDaSource|GeneCards
NPM3NPM3nucleophosmin/nucleoplasmin, 3Source|GeneCards
ZNF9ZNF9zinc finger protein 9 (a cellular retroviral nucleic acid binding protein)Source|GeneCards
GPX1GPX1glutathione peroxidase 1Source|GeneCards
UBE2HUBE2Hubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)Source|GeneCards
TACSTD2TACSTD2tumor-associated calcium signal transducer 2Source|GeneCards
PPP1R10PPP1R10protein phosphatase 1, regulatory subunit 10Source|GeneCards
TLK1TLK1tousled-like kinase 1Source|GeneCards
BRIP1BRIP1BRCA1 interacting protein C-terminal helicase 1Source|GeneCards
ARHGEF2ARHGEF2rho/rac guanine nucleotide exchange factor (GEF) 2Source|GeneCards
LAG3LAG3lymphocyte-activation gene 3Source|GeneCards
CBFA2T1RUNX1T1runt-related transcription factor 1; translocated to, 1 (cyclin D-related)Source|GeneCards
SLITRK6SLITRK6SLIT and NTRK-like family, member 6Source|GeneCards
DTNADTNAdystrobrevin, alphaSource|GeneCards
PKD1-LIKEPKD1-LIKEpolycystic kidney disease 1-likeSource|GeneCards
SLC38A2SLC38A2solute carrier family 38, member 2Source|GeneCards
C1QTNF6C1QTNF6C1q and tumor necrosis factor related protein 6Source|GeneCards
ITGB3BPITGB3BPintegrin beta 3 binding protein (beta3-endonexin)Source|GeneCards
TRERF1TRERF1transcriptional regulating factor 1Source|GeneCards
HKE2HKE2HLA class II region expressed gene KE2Source|GeneCards
MRPS18BMRPS18Bmitochondrial ribosomal protein S18BSource|GeneCards
OMDOMDosteomodulinSource|GeneCards
TBNTBNtaube nuss homolog (mouse)Source|GeneCards
LAMC1LAMC1laminin, gamma 1 (formerly LAMB2)Source|GeneCards
DPYSL2DPYSL2dihydropyrimidinase-like 2Source|GeneCards
DNAJC5BDNAJC5BDnaJ (Hsp40) homolog, subfamily C, member 5 betaSource|GeneCards
IHPK2IHPK2inositol hexaphosphate kinase 2Source|GeneCards
FLJ46020FLJ46020FLJ46020 proteinSource|GeneCards
ZFYVE1ZFYVE1zinc finger, FYVE domain containing 1Source|GeneCards
NINNINninein (GSK3B interacting protein)Source|GeneCards
WHSC1L1WHSC1L1Wolf-Hirschhorn syndrome candidate 1-like 1Source|GeneCards
NR4A1NR4A1nuclear receptor subfamily 4, group A, member 1Source|GeneCards
LOC126147LOC126147hypothetical protein BC018697Source|GeneCards
LOC92799LOC92799hypothetical protein BC007653Source|GeneCards
CLDN8CLDN8claudin 8Source|GeneCards
SSBP3SSBP3single stranded DNA binding protein 3Source|GeneCards
RAB9ARAB9ARAB9A, member RAS oncogene familySource|GeneCards
IBSPIBSPintegrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II)Source|GeneCards
BDHBDH3-hydroxybutyrate dehydrogenase (heart, mitochondrial)Source|GeneCards
PPM1DPPM1Dprotein phosphatase 1D magnesium-dependent, delta isoformSource|GeneCards
FOXB1FOXB1forkhead box B1Source|GeneCards
LOC165186LOC165186similar to RIKEN cDNA 4632412N22 geneSource|GeneCards
HHEXHHEXhematopoietically expressed homeoboxSource|GeneCards
EFEMP1EFEMP1EGF-containing fibulin-like extracellular matrix protein 1Source|GeneCards
MGC26816MGC26816hypothetical protein MGC26816Source|GeneCards
MCCMCCmutated in colorectal cancersSource|GeneCards
PURAPURApurine-rich element binding protein ASource|GeneCards
HOXC6HOXC6homeo box C6Source|GeneCards
NCAM1NCAM1neural cell adhesion molecule 1Source|GeneCards
TOB1TOB1transducer of ERBB2, 1Source|GeneCards
VAX1VAX1ventral anterior homeobox 1Source|GeneCards
NCDNNCDNneurochondrinSource|GeneCards
FLJ23865FLJ23865hypothetical protein FLJ23865Source|GeneCards
CACNA1DCACNA1Dcalcium channel, voltage-dependent, L type, alpha 1D subunitSource|GeneCards
HHIPHHIPhedgehog interacting proteinSource|GeneCards
SLC16A6SLC16A6solute carrier family 16 (monocarboxylic acid transporters), member 6Source|GeneCards
NFIBNFIBnuclear factor I/BSource|GeneCards
ENPEPENPEPglutamyl aminopeptidase (aminopeptidase A)Source|GeneCards
C9ORF27C9ORF27chromosome 9 open reading frame 27Source|GeneCards
TRIM8TRIM8tripartite motif-containing 8Source|GeneCards
EIF4EBP2EIF4EBP2eukaryotic translation initiation factor 4E binding protein 2Source|GeneCards
MGC33488MGC33488hypothetical protein MGC33488Source|GeneCards
ETV5ETV5ets variant gene 5 (ets-related molecule)Source|GeneCards
SERTAD4SERTAD4SERTA domain containing 4Source|GeneCards
RASSF2RASSF2Ras association (RalGDS/AF-6) domain family 2Source|GeneCards
MGC2629ZBTB37zinc finger and BTB domain containing 37Source|GeneCards
POU3F4POU3F4POU domain, class 3, transcription factor 4Source|GeneCards
NIFIE14NIFIE14seven transmembrane domain proteinSource|GeneCards
IDN3NIPBLNipped-B homolog (Drosophila)Source|GeneCards
MSL3L1MSL3L1male-specific lethal 3-like 1 (Drosophila)Source|GeneCards
HRHRhairless homolog (mouse)Source|GeneCards
MAPK3MAPK3mitogen-activated protein kinase 3Source|GeneCards
MSPLMLNleishmanolysin-like (metallopeptidase M8 family)Source|GeneCards
WINS1LINS1lines homolog 1 (Drosophila)Source|GeneCards
FLJ10945FLJ10945hypothetical protein FLJ10945Source|GeneCards
LPPR2LPPR2lipid phosphate phosphatase-related protein type 2Source|GeneCards
PRDM1PRDM1PR domain containing 1, with ZNF domainSource|GeneCards
PHEXPHEXphosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets)Source|GeneCards
HOXC4HOXC4homeo box C4Source|GeneCards
SCN4BSCN4Bsodium channel, voltage-gated, type IV, betaSource|GeneCards
R-SPONDINR-SPONDINR-spondin homolog (Xenopus laevis)Source|GeneCards
PDZRN4PDZRN4PDZ domain containing RING finger 4Source|GeneCards
HOXB8HOXB8homeo box B8Source|GeneCards
CYP26B1CYP26B1cytochrome P450, family 26, subfamily B, polypeptide 1Source|GeneCards
PPP2R2BPPP2R2Bprotein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoformSource|GeneCards
DOCK1DOCK1dedicator of cytokinesis 1Source|GeneCards
POU2AF1POU2AF1POU domain, class 2, associating factor 1Source|GeneCards
OPA3OPA3optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)Source|GeneCards
DKFZP566A1524FAM49Afamily with sequence similarity 49, member ASource|GeneCards
MGC34774MGC34774ribosomal protein L13A-likeSource|GeneCards
FOXP2FOXP2forkhead box P2Source|GeneCards
EGR2EGR2early growth response 2 (Krox-20 homolog, Drosophila)Source|GeneCards
CMT4B2SBF2SET binding factor 2Source|GeneCards
PMCHPMCHpro-melanin-concentrating hormoneSource|GeneCards
CXORF12CXORF12chromosome X open reading frame 12Source|GeneCards
HOXB4HOXB4homeo box B4Source|GeneCards
ZNF297ZNF297zinc finger protein 297Source|GeneCards
TBX4TBX4T-box 4Source|GeneCards
ZNF238ZNF238zinc finger protein 238Source|GeneCards
CPNE1CPNE1RNA binding motif protein 12Source|GeneCards
CREB5CREB5cAMP responsive element binding protein 5Source|GeneCards
ANGPTL1ANGPTL1angiopoietin-like 1Source|GeneCards
BRMS1LBRMS1Lbreast cancer metastasis-suppressor 1-likeSource|GeneCards
EMX2EMX2empty spiracles homolog 2 (Drosophila)Source|GeneCards
BIG1ARFGEF1ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)Source|GeneCards
FLJ37266FLJ37266hypothetical protein FLJ37266Source|GeneCards
CHD1CHD1chromodomain helicase DNA binding protein 1Source|GeneCards
LGI1LGI1leucine-rich, glioma inactivated 1Source|GeneCards
SALL3SALL3sal-like 3 (Drosophila)Source|GeneCards
FIBL-6FIBL-6hemicentinSource|GeneCards
LAKARL7ADP-ribosylation factor-like 7Source|GeneCards
C20ORF17C20ORF17chromosome 20 open reading frame 17Source|GeneCards
C6ORF11C6ORF11chromosome 6 open reading frame 11Source|GeneCards
NEDD4NEDD4neural precursor cell expressed, developmentally down-regulated 4Source|GeneCards
C7ORF33C7ORF33chromosome 7 open reading frame 33Source|GeneCards
MORCMORC1MORC family CW-type zinc finger 1Source|GeneCards
DOCK3DOCK3dedicator of cytokinesis 3Source|GeneCards
HSD11B1HSD11B1hydroxysteroid (11-beta) dehydrogenase 1Source|GeneCards
KCNQ5KCNQ5potassium voltage-gated channel, KQT-like subfamily, member 5Source|GeneCards
RNF17RNF17ring finger protein 17Source|GeneCards
PRKAG1PRKAG1protein kinase, AMP-activated, gamma 1 non-catalytic subunitSource|GeneCards
HMP19HMP19HMP19 proteinSource|GeneCards
KCNIP4KCNIP4Kv channel interacting protein 4Source|GeneCards
FLJ33387FLJ33387hypothetical protein FLJ33387Source|GeneCards
SEMA6DSEMA6Dsema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6DSource|GeneCards
NEO1NEO1neogenin homolog 1 (chicken)Source|GeneCards
EFNA5EFNA5ephrin-A5Source|GeneCards
FLJ20618FLJ20618hypothetical protein FLJ20618Source|GeneCards
C14ORF166C14ORF166chromosome 14 open reading frame 166Source|GeneCards
LCP2LCP2lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)Source|GeneCards
SLU7SLU7step II splicing factor SLU7Source|GeneCards
DNAJB12DNAJB12DnaJ (Hsp40) homolog, subfamily B, member 12Source|GeneCards
PROX1PROX1prospero-related homeobox 1Source|GeneCards
MYL1MYL1myosin, light polypeptide 1, alkali; skeletal, fastSource|GeneCards
SLC12A5SLC12A5solute carrier family 12, (potassium-chloride transporter) member 5Source|GeneCards
ZADH2ZADH2zinc binding alcohol dehydrogenase, domain containing 2Source|GeneCards
TAF5LTAF5LTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDaSource|GeneCards
C14ORF138C14ORF138chromosome 14 open reading frame 138Source|GeneCards
FLJ42957FLJ42957FLJ42957 proteinSource|GeneCards
FSTL1FSTL1follistatin-like 1Source|GeneCards
ING3ING3inhibitor of growth family, member 3Source|GeneCards
FCHSD2FCHSD2FCH and double SH3 domains 2Source|GeneCards
C1QTNF3C1QTNF3C1q and tumor necrosis factor related protein 3Source|GeneCards
CAPN3CAPN3calpain 3, (p94)Source|GeneCards
STAG2STAG2stromal antigen 2Source|GeneCards
XTP2BAT2D1BAT2 domain containing 1Source|GeneCards
SATB2SATB2SATB family member 2Source|GeneCards
ANKRD28ANKRD28ankyrin repeat domain 28Source|GeneCards
MGC3047MGC3047hypothetical protein MGC3047Source|GeneCards
ASB7ASB7ankyrin repeat and SOCS box-containing 7Source|GeneCards
GTF2A1GTF2A1general transcription factor IIA, 1, 19/37kDaSource|GeneCards
KRTAP5.5KRTAP5-5keratin associated protein 5-5Source|GeneCards
LHX9LHX9LIM homeobox 9Source|GeneCards
LOC129642LOC129642hypothetical protein BC016005Source|GeneCards
INHBAINHBAinhibin, beta A (activin A, activin AB alpha polypeptide)Source|GeneCards
ATP2A2ATP2A2ATPase, Ca++ transporting, cardiac muscle, slow twitch 2Source|GeneCards
TAIP-2TAIP-2TGF-beta induced apotosis protein 2Source|GeneCards
GRB7GRB7growth factor receptor-bound protein 7Source|GeneCards
FLJ25333FAM81Bfamily with sequence similarity 81, member BSource|GeneCards
A2BP1A2BP1ataxin 2-binding protein 1Source|GeneCards
SCG3SCG3Secretogranin IIISource|GeneCards
ARHGEF17ARHGEF17Rho guanine nucleotide exchange factor (GEF) 17Source|GeneCards
DKFZP566M114DKFZP566M114hypothetical protein DKFZp566M114Source|GeneCards
OTX1OTX1orthodenticle homolog 1 (Drosophila)Source|GeneCards
TIMM8ATIMM8Atranslocase of inner mitochondrial membrane 8 homolog A (yeast)Source|GeneCards
ESM1ESM1endothelial cell-specific molecule 1Source|GeneCards
ATP1B4ATP1B4ATPase, (Na+)/K+ transporting, beta 4 polypeptideSource|GeneCards
NEUROD4NEUROD4neurogenic differentiation 4Source|GeneCards
CASKCASKcalcium/calmodulin-dependent serine protein kinase (MAGUK family)Source|GeneCards
KRTAP17-1KRTAP17-1keratin associated protein 17-1Source|GeneCards
ICKICKintestinal cell (MAK-like) kinaseSource|GeneCards
SLIT3SLIT3slit homolog 3 (Drosophila)Source|GeneCards
C9ORF86C9ORF86chromosome 9 open reading frame 86Source|GeneCards
LOC153222LOC153222adult retina proteinSource|GeneCards
CGI-14CGI-14CGI-14 proteinSource|GeneCards
WNT2WNT2wingless-type MMTV integration site family member 2Source|GeneCards
SLC39A8SLC39A8solute carrier family 39 (zinc transporter), member 8Source|GeneCards
DMDDMDdystrophin (muscular dystrophy, Duchenne and Becker types)Source|GeneCards
PHF8PHF8PHD finger protein 8Source|GeneCards
C2ORF11C2ORF11chromosome 2 open reading frame 11Source|GeneCards
FLJ37543FLJ37543hypothetical protein FLJ37543Source|GeneCards
CRHCRHcorticotropin releasing hormoneSource|GeneCards
EZH1EZH1enhancer of zeste homolog 1 (Drosophila)Source|GeneCards
KIAA0779TMCC1transmembrane and coiled-coil domain family 1Source|GeneCards
ELAVL2ELAVL2ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)Source|GeneCards
VITVITvitrinSource|GeneCards
SMAD1SMAD1SMAD, mothers against DPP homolog 1 (Drosophila)Source|GeneCards
AP1G2AP1G2adaptor-related protein complex 1, gamma 2 subunitSource|GeneCards
NTN1NTN1netrin 1Source|GeneCards
MIG-6ERRFI1ERBB receptor feedback inhibitor 1Source|GeneCards
C9ORF37C9ORF37chromosome 9 open reading frame 37Source|GeneCards
PPP1CBPPP1CBprotein phosphatase 1, catalytic subunit, beta isoformSource|GeneCards
DKFZP434J154DKFZP434J154DKFZP434J154 proteinSource|GeneCards
HOXA11HOXA11homeo box A11Source|GeneCards
CLN5CLN5ceroid-lipofuscinosis, neuronal 5Source|GeneCards
SNCAIPSNCAIPsynuclein, alpha interacting protein (synphilin)Source|GeneCards
CD2BP2CD2BP2CD2 antigen (cytoplasmic tail) binding protein 2Source|GeneCards
SHANK2SHANK2SH3 and multiple ankyrin repeat domains 2Source|GeneCards
ELF1ELF1E74-like factor 1 (ets domain transcription factor)Source|GeneCards
SECISBP2SECISBP2SECIS binding protein 2Source|GeneCards
MAPK10MAPK10mitogen-activated protein kinase 10Source|GeneCards
NR4A2NR4A2nuclear receptor subfamily 4, group A, member 2Source|GeneCards
GRIK3GRIK3glutamate receptor, ionotropic, kainate 3Source|GeneCards
CITED2CITED2Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2Source|GeneCards
ATOH1ATOH1atonal homolog 1 (Drosophila)Source|GeneCards
FGF9FGF9fibroblast growth factor 9 (glia-activating factor)Source|GeneCards
SE20-4TSPYL2TSPY-like 2Source|GeneCards
ASPAASPAaspartoacylase (aminoacylase 2, Canavan disease)Source|GeneCards
PCDH7PCDH7BH-protocadherin (brain-heart)Source|GeneCards
FSTFSTfollistatinSource|GeneCards
SOX2SOX2SRY (sex determining region Y)-box 2Source|GeneCards
HTR1BHTR1B5-hydroxytryptamine (serotonin) receptor 1BSource|GeneCards
OTPOTPorthopedia homolog (Drosophila)Source|GeneCards
SLC6A14SLC6A14solute carrier family 6 (neurotransmitter transporter), member 14Source|GeneCards
HOXA10HOXA10homeo box A10Source|GeneCards
KIAA1318RGAG1retrotransposon gag domain containing 1Source|GeneCards
MGC46534ATXN7L2ataxin 7-like 2Source|GeneCards
DUSP1DUSP1dual specificity phosphatase 1Source|GeneCards
LOC257106LOC257106hypothetical protein LOC257106Source|GeneCards
MGC48986ODF3L1outer dense fiber of sperm tails 3-like 1Source|GeneCards
KLF12KLF12Kruppel-like factor 12Source|GeneCards
NLGN3NLGN3neuroligin 3Source|GeneCards
BCL11ABCL11AB-cell CLL/lymphoma 11A (zinc finger protein)Source|GeneCards
OTX2OTX2orthodenticle homolog 2 (Drosophila)Source|GeneCards
IRS4IRS4insulin receptor substrate 4Source|GeneCards
GRIK2GRIK2Glutamate receptor, ionotropic, kainate 2Source|GeneCards
SOX14SOX14SRY (sex determining region Y)-box 14Source|GeneCards
FEZLZNF312zinc finger protein 312Source|GeneCards
IMPDH2IMPDH2IMP (inosine monophosphate) dehydrogenase 2Source|GeneCards


[an error occurred while processing this directive]