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Gene set: V$HOXA3_01 (C3:TFAC:0203)
Standard nameV$HOXA3_01
Systematic nameC3:TFAC:0203
Brief descriptionGenes with 3'UTR containing motif CNTANNNKN which matches annotation for HOXA3: homeo box A3
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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FA HOXA3
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SY Hox-1.5; Hoxa-3; HOX1E (human).
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OS mouse, Mus musculus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
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HO Pb (Drosophila)
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CL C0006; homeo; 3.1.1.2.9.
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SZ 443 AA; 46.4 kDa (cDNA)
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SC translated from EMBL #Y11717
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FT 79 138 proline-rich region (31/60).
FT 79 138 PS50099; PRO_RICH_1.
FT 156 161 Antp type conserved hexapeptide.
FT 192 251 homeo domain.
FT 192 254 SM00389; HOX.
FT 193 249 PF00046; homeobox.
FT 289 326 PS50099; PRO_RICH_2.
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SF differential binding specificity in comparison with Msx-1 or En-1 is
SF defined by nucleotides 3'-flanking to the TAAT core of the recognition
SF sequence due to kinetic reasons [3];
SF the homeo domain of HOXA3 differs from HOXD3 and HOXB3 only in one amino
SF acid residue [2];
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CP aortic trunk, kidney, lung, pharynx, spinal cord, spinal ganglia, spleen,
CP stomach, thyroid [4]
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FF required for development of thymus and parathyroid and for full development
FF of thyroid and submaxillary tissue [4];
FF mutants have defects in heart and arteries and reveal cranofacial
FF abnormalities, similar to human DiGeorge's syndrome [4];
FF also expressed in certain kidney substructures [1];
FF subject to autoregulation [7];
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RN [1]; RE0014517.
RA Davies J. A., Brandli A. W.
RT The Kidney Development Database; URL:
RT http://www.ana.ed.ac.uk/anatomy/database/kidbase/tranfack.html
RL Internet : (1997).
RN [2]; RE0013202.
RX MEDLINE; 96323206.
RA Tan D.-P., Shao X., Pu L., Guo V., Nirenberg M.
RT Sequence and expression of the murine Hoxd-3 homeobox gene
RL Proc. Natl. Acad. Sci. USA 93:8247-8252 (1996).
RN [3]; RE0003871.
RX MEDLINE; 93204981.
RA Catron K. M., Iller N., Abate C.
RT Nucleotides flanking a conserved TAAT core dictate the DNA binding
RT specifity of three murine homeodomain proteins
RL Mol. Cell. Biol. 13:2354-2365 (1993).
RN [4]; RE0003873.
RX MEDLINE; 91194760.
RA Chisaka O., Capecchi M. R.
RT Regionally restricted developmental defects resulting from targeted
RT disruption of the mouse homeobox gene hox-1.5
RL Nature 350:473-479 (1991).
RN [5]; RE0006757.
RX MEDLINE; 89064559.
RA Gaunt S. J.
RT Mouse homeobox gene transcripts occupy different but overlapping domains in
RT embryonic germ layers and organs: a comparison of Hox-3.1 and Hox-1.5
RL Development 103:135-144 (1988).
RN [6]; RE0006758.
RX MEDLINE; 88211484.
RA Gaunt S. J.
RT Homoeobox gene Hox-1.5 expression in mouse embryos: earliest detection by
RT in situ hybridization is during gastrulation
RL Development 101:51-60 (1987).
RN [7]; RE0002306.
RX MEDLINE; 87092283.
RA Fainsod A., Bogarad L. D., Ruusala T., Lubin M., Crothers D. M., Ruddle F.
RA H.
RT The homeo domain of a murine protein binds 5' to its own homeo box
RL Proc. Natl. Acad. Sci. USA 83:9532-9536 (1986).
RN [8]; RE0003872.
RX MEDLINE; 85024859.
RA McGinnis W., Hart C. P., Gehring W. J., Ruddle F. H.
RT Molecular cloning and chromosome mapping of a mouse DNA sequence homologous
RT to homeotic genes of Drosophila
RL Cell 38:675-680 (1984).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

14 genes, 14 accessions (Toggle view)

AccessionGeneTitleLinks
SHOX2SHOX2short stature homeobox 2Source|GeneCards
FLJ90724HTRA4HtrA serine peptidase 4Source|GeneCards
FLJ35808FLJ35808hypothetical protein FLJ35808Source|GeneCards
RBMS1RBMS1RNA binding motif, single stranded interacting protein 1Source|GeneCards
LMO2LMO2LIM domain only 2 (rhombotin-like 1)Source|GeneCards
C1QL1C1QL1complement component 1, q subcomponent-like 1Source|GeneCards
C6ORF4C6ORF4chromosome 6 open reading frame 4Source|GeneCards
DHHDHHdesert hedgehog homolog (Drosophila)Source|GeneCards
GRK6GRK6G protein-coupled receptor kinase 6Source|GeneCards
TXNRD1TXNRD1thioredoxin reductase 1Source|GeneCards
SIM1SIM1single-minded homolog 1 (Drosophila)Source|GeneCards
FCHSD1FCHSD1FCH and double SH3 domains 1Source|GeneCards
SALL1SALL1sal-like 1 (Drosophila)Source|GeneCards
LTBP1LTBP1latent transforming growth factor beta binding protein 1Source|GeneCards


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