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Gene set: V$LUN1_01 (C3:TFAC:0261)
Standard nameV$LUN1_01
Systematic nameC3:TFAC:0261
Brief descriptionGenes with 3'UTR containing motif TCCCAGCTACTTTGGGA which matches annotation for TOPORS: topoisomerase I binding, arginine/serine-rich
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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FA LUN-1
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SY lung.
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OS human, Homo sapiens
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; primates
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CL C0049; RING.
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SZ 1045 AA; 119.2 kDa (calc)
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SC translated from EMBL #AB045732
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FT 13 28 PEST sequence [1].
FT 103 141 RING finger domain [1].
FT 103 141 PF00097; zf-C3HC4.
FT 103 141 SM00184; RING.
FT 293 365 putative leucine zipper [1].
FT 386 432 PEST sequence [1].
FT 490 509 PEST sequence [1].
FT 616 645 putative bipartite nuclear localization signal [1].
FT 616 622 putative NLS (nuclear localization signal) [1].
FT 700 703 putative SUMO-1 conjugation site [1].
FT 836 839 putative SUMO-1 conjugation site [1].
FT 921 950 PEST sequence [1].
FT 999 1024 PEST sequence [1].
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SF Zn2+ ions with either Mg2+, Mn2+ or Ca2+ are essential for the binding of
SF LUN to DNA [1];
SF binds to a palindromic binding consensus (TCCCAgcacttTGGGA) [1];
SF splice variant LUN-2 ;
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CP (cell lines:) T98, Molt-4, (adult:) most highly expressed in lung (alveolar
CP epithelium), moderade expression in heart, brain, skeletal muscle, kidney,
CP liver, spleen, pancreas [1]
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FF might be an important transcriptional regulator for lung cancer-associated
FF genes including E-cadherin and talin [1]
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RN [1]; RE0016839.
RX MEDLINE; 21216701.
RA Chu D., Kakazu N., Gorrin-Rivas M. J., Lu H. P., Kawata M., Abe T., Ueda
RA K., Adachi Y.
RT Cloning and characterization of LUN, a novel ring finger protein that is
RT highly expressed in lung and specifically binds to a palindromic sequence
RL J. Biol. Chem. 276:14004-14013 (2001).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

4 genes, 4 accessions (Toggle view)

AccessionGeneTitleLinks
NRGNNRGNneurogranin (protein kinase C substrate, RC3)Source|GeneCards
TRPV6TRPV6transient receptor potential cation channel, subfamily V, member 6Source|GeneCards
PTK7PTK7PTK7 protein tyrosine kinase 7Source|GeneCards
KIAA0182KIAA0182KIAA0182 proteinSource|GeneCards


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