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Gene set: V$PBX1_02 (C3:TFAC:0075)
Standard nameV$PBX1_02
Systematic nameC3:TFAC:0075
Brief descriptionGenes with 3'UTR containing motif NNCATCAATCAANNW which matches annotation for PBX1: pre-B-cell leukemia transcription factor 1
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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FA Pbx-1a
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SY Pbx-1; Pbx1; pre B-cell leukemia transcription factor 1a; Prl.
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OS human, Homo sapiens
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; primates
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HO Exd (Drosophila), MATa1 (yeast), ceh-20 (C.elegans)
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CL C0006; homeo; 3.1.1.18.4.1.
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SZ 430 AA; 46.6 kDa (cDNA)
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SC SwissProt #P40424
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FT 1 140 PKNOX1 interaction domain [4].
FT 33 232 PF03792; PBX.
FT 127 135 alanine-rich region (9/9).
FT 233 298 SM00389; HOX.
FT 234 293 PF00046; homeobox.
FT 236 295 homeo domain.
FT 334 430 replaced by 334-347 in Pbx-1b.
FT 347 430 transactivation domain [5].
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SF divergent homeo domain, most similar to yeast MATa1 [1];
SF TALE (three amino acid loop extension) homeo domain superclass [6];
SF co-factor for many, but not all homeo domain proteins [8] [9];
SF cooperative binding with Meis-1 and PKNOX1 which
SF is disrupted in the oncoprotein E2A-Pbx1 [7] [4];
SF subunit of the UEF-3 complex [3];
SF interacts DNA indepently with PKNOX1 and increases binding
SF affinity [3] [4];
SF PKNOX1-Pbx-1 complexes are present during mouse embryogenesis [4];
SF mediates DNA dependent ternary complex with HOXB1 [5] and PKNOX1
SF [4];
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CN (cell lines:) lymphoid cells
EX adrenal gland (right and left),,,fetal;high; northern blot; mRNA (poly-A);
EX [1].
EX blood,basophil granulocyte,Circulatory System & Hematopoietic
EX System,adult;low; northern blot; mRNA (poly-A); [1].
EX blood,eosinophil granulocyte,Circulatory System & Hematopoietic
EX System,adult;low; northern blot; mRNA (poly-A); [1].
EX blood,lymphocyte,Circulatory System & Hematopoietic System,adult;low;
EX northern blot; mRNA (poly-A); [1].
EX blood,monocyte,Circulatory System & Hematopoietic System,adult;low;
EX northern blot; mRNA (poly-A); [1].
EX blood,neutrophil granulocyte,Circulatory System & Hematopoietic
EX System,adult;low; northern blot; mRNA (poly-A); [1].
EX brain,,,fetal;very high; northern blot; mRNA (poly-A); [1].
EX gut,,,fetal;medium; northern blot; mRNA (poly-A); [1].
EX heart,,,adult;medium; northern blot; mRNA (poly-A); [1].
EX heart,,,fetal;high; northern blot; mRNA (poly-A); [1].
EX kidney (right and left),,,adult;none; northern blot; mRNA (poly-A); [1].
EX kidney (right and left),,,fetal;high; northern blot; mRNA (poly-A); [1].
EX liver,,,fetal;medium; northern blot; mRNA (poly-A); [1].
EX lung (right and left),,,fetal;high; northern blot; mRNA (poly-A); [1].
EX ovary (right and left),,,adult;medium; northern blot; mRNA (poly-A); [1].
EX spleen,,,fetal;medium; northern blot; mRNA (poly-A); [1].
EX thymus,,,adult;none; northern blot; mRNA (poly-A); [1].
EX thymus,,,fetal;medium; northern blot; mRNA (poly-A); [1].
EX tonsil,,,adult;medium; northern blot; mRNA (poly-A); [1].
EX uterus,,,adult;medium; northern blot; mRNA (poly-A); [1].
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FF in acute lymphoblastic leukemias, a t(1;
FF 19)(q23;
FF p13.3) translocation fuses the trans-activation domain encoded by the E2A
FF gene with the homeobox of PBX1 [15] [16] [14];
FF the resulting chimeric protein (E2A-Pbx1) causes acute myeloid leukemia
FF [12] and induces enhanced proliferation as well as apoptosis [13] probably
FF by interfering with differentiation regulation by homeo domain factors [8]
FF [9] and acting as a strong activator [10];
FF acts as cofactor of HOXB1 and cooperative transcriptional
FF activator [5];
FF PKNOX2/Pbx-1a heterodimer (T01481/T05155) shows faster DNA-dissociation
FF rate (binding site: ) than PKNOX1/Pbx-1a heterodimer
FF (T01481/T04122) [2];
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IN T04122; PKNOX1; human, Homo sapiens.
IN T05155; PKNOX2; human, Homo sapiens.
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RN [1]; RE0005181.
RX MEDLINE; 92049345.
RA Monica K., Saltman D., Nourse J., Galili N., Cleary M. L.
RT PBX2 and PBX3, new homeobox genes with extensive homology to the human
RT proto-oncogene PBX1
RL Mol. Cell. Biol. 11:6149-6157 (1991).
RN [2]; RE0017883.
RX MEDLINE; 21970090.
RA Fognani C., Kilstrup-Nielsen C., Berthelsen J., Ferretti E., Zappavigna V.,
RA Blasi F.
RT Characterization of PREP2, a paralog of PREP1, which defines a novel
RT sub-family of the MEINOX TALE homeodomain transcription factors
RL Nucleic Acids Res 30:2043-2051 (2002).
RN [3]; RE0015488.
RX MEDLINE; 98151366.
RA Berthelsen J., Zappavigna V., Mavilio F., Blasi F.
RT Prep1, a novel functional partner of Pbx proteins
RL EMBO J. 17:1423-1433 (1998).
RN [4]; RE0015500.
RX MEDLINE; 98151367.
RA Berthelsen J., Zappavigna V., Ferretti E., Mavilio F., Blasi F.
RT The novel homeoprotein Prep1 modulates Pbx-Hox protein cooperativity
RL EMBO J. 17:1434-1445 (1998).
RN [5]; RE0005973.
RX MEDLINE; 97361844.
RA Rocco di G., Mavilio F., Zappavigna V.
RT Functional dissection of a transcripitonally active, target-specific
RT Hox-Pbx complex
RL EMBO J. 16:3644-3654 (1997).
RN [6]; RE0014544.
RX MEDLINE; 97478541.
RA Burglin T. R.
RT Analysis of TALE superclass homeobox genes (MEIS, PBC, KNOX, Iroquois,
RT TGIF) reveals a novel domain conserved between plants and animals
RL Nucleic Acids Res. 25:4173-4180 (1997).
RN [7]; RE0015495.
RX MEDLINE; 98070790.
RA Knoepfler P. S., Calvo K. R., Chen H., Antonarakis S. E., Kamps M. P.
RT Meis1 and pKnox1 bind DNA cooperatively with Pbx1 utilizing an interaction
RT surface disrupted in oncoprotein E2a-Pbx1
RL Proc. Natl. Acad. Sci. USA 94:14553-14558 (1997).
RN [8]; RE0005178.
RX MEDLINE; 95311977.
RA Lu Q., Knoepfler P. S., Scheele J., Wright D. D., Kamps M. P.
RT Both Pbx1 and E2A-Pbx1 bind the DNA motif ATCAATCAA cooperatively with the
RT products of multiple murine Hox genes, some of wich are themselves oncogenes
RL Mol. Cell. Biol. 15:3786-3795 (1995).
RN [9]; RE0005179.
RX MEDLINE; 95349565.
RA Phelan M. L., Rambaldi I., Featherstone M. S.
RT Cooperative interactions between HOX and PBX proteins mediated by a
RT conserved peptide motif
RL Mol. Cell. Biol. 15:3989-3997 (1995).
RN [10]; RE0003009.
RX MEDLINE; 94254851.
RA Lu Q., Wright D. D., Kamps M. P.
RT Fusion with E2A converts the Pbx1 homeodomain protein into a constitutive
RT transcriptional activator in human leukemias carrying the t(1;19)
RT translocation
RL Mol. Cell. Biol. 14:3938-3948 (1994).
RN [11]; RE0005177.
RX MEDLINE; 94308119.
RA Kagawa N., Ogo A., Takahashi Y., Iwamatsu A., Waterman M. R.
RT A cAMP-regulatory sequence (CRS1) of CYP17 is a cellular target for the
RT homeodomain protein Pbx1
RL J. Biol. Chem. 269:18716-18719 (1994).
RN [12]; RE0004018.
RX MEDLINE; 93109319.
RA Kamps M. P., Baltimore D.
RT E2A-Pbx1, the t(1;19) translocation protein of human pre-B-cell acute
RT lymphocytic leukemia causes acute myeloid leukemia in mice
RL Mol. Cell. Biol. 13:351-357 (1993).
RN [13]; RE0005180.
RX MEDLINE; 93386756.
RA Dedera D. A., Waller E. K., LeBrun D. P., Sen-Majumdar A., Stevens M. E.,
RA Barsh G. S., Cleary M. L.
RT Chimeric homeobox gene E2A-PBX1 induces proliferation, apoptosis, and
RT malignant lymphomas in transgenic mice
RL Cell 74:833-843 (1993).
RN [14]; RE0000671.
RX MEDLINE; 91160969.
RA Kamps M. P., Look A. T., Baltimore D.
RT The human t(1;19) translocation in pre-B ALL produces multiple nuclear
RT E2A-Pbx1 fusion proteins with differing transforming potentials
RL Genes Dev. 5:358-368 (1991).
RN [15]; RE0000161.
RX MEDLINE; 90150281.
RA Nourse J., Mellentin J. D., Galili N., Wilkinson J., Stanbridge E., Smith
RA S. D., Cleary M. L.
RT Chromosomal translocation t(1;19) results in synthesis of a homeobox fusion
RT mRNA that codes for a potential chimeric transcription factor
RL Cell 60:535-545 (1990).
RN [16]; RE0004014.
RX MEDLINE; 90150282.
RA Kamps M. P., Murre C., Sun X. H., Baltimore D.
RT A new homeobox gene contributes the DNA binding domain oft the t(1; 19)
RT translocation protein in pre-B ALL
RL Cell 60:547-555 (1990).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
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Genes

133 genes, 133 accessions (Toggle view)

AccessionGeneTitleLinks
BTEB1KLF9Kruppel-like factor 9Source|GeneCards
IGF2IGF2insulin-like growth factor 2 (somatomedin A)Source|GeneCards
C10ORF11C10ORF11chromosome 10 open reading frame 11Source|GeneCards
EGR3EGR3early growth response 3Source|GeneCards
CCL11CCL11chemokine (C-C motif) ligand 11Source|GeneCards
LRCH2LRCH2leucine-rich repeats and calponin homology (CH) domain containing 2Source|GeneCards
ZNF238ZNF238zinc finger protein 238Source|GeneCards
IRX4IRX4iroquois homeobox protein 4Source|GeneCards
C9ORF9C9ORF9chromosome 9 open reading frame 9Source|GeneCards
FLJ21168FLJ21168hypothetical protein FLJ21168Source|GeneCards
EML1EML1echinoderm microtubule associated protein like 1Source|GeneCards
SLITRK2SLITRK2SLIT and NTRK-like family, member 2Source|GeneCards
ZNF503ZNF503zinc finger protein 503Source|GeneCards
LOC283514LOC283514similar to seven in absentia 2Source|GeneCards
COL16A1COL16A1collagen, type XVI, alpha 1Source|GeneCards
GSK3BGSK3Bglycogen synthase kinase 3 betaSource|GeneCards
FLJ14437
HES1HES1hairy and enhancer of split 1, (Drosophila)Source|GeneCards
MEIS2MEIS2Meis1, myeloid ecotropic viral integration site 1 homolog 2 (mouse)Source|GeneCards
MGAT5BMGAT5Bmannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isoenzyme BSource|GeneCards
HH114HH114hypothetical protein HH114Source|GeneCards
PITX2PITX2paired-like homeodomain transcription factor 2Source|GeneCards
C20ORF79C20ORF79chromosome 20 open reading frame 79Source|GeneCards
EEF1A2EEF1A2eukaryotic translation elongation factor 1 alpha 2Source|GeneCards
ADCYAP1ADCYAP1adenylate cyclase activating polypeptide 1 (pituitary)Source|GeneCards
TFDP2TFDP2transcription factor Dp-2 (E2F dimerization partner 2)Source|GeneCards
TLE4TLE4transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)Source|GeneCards
C20ORF17C20ORF17chromosome 20 open reading frame 17Source|GeneCards
ZHX2ZHX2transcription factor ZHX2Source|GeneCards
TLK1TLK1tousled-like kinase 1Source|GeneCards
TFR2TFR2transferrin receptor 2Source|GeneCards
EFNA5EFNA5ephrin-A5Source|GeneCards
MGC10946MGC10946hypothetical protein MGC10946Source|GeneCards
CCNG1CCNG1cyclin G1Source|GeneCards
VMD2L2VMD2L2vitelliform macular dystrophy 2-like 2Source|GeneCards
IGF2ASIGF2ASinsulin-like growth factor 2, antisenseSource|GeneCards
SNX1SNX1sorting nexin 1Source|GeneCards
WDR1WDR1WD repeat domain 1Source|GeneCards
NDST4NDST4N-deacetylase/N-sulfotransferase 4Source|GeneCards
CCND2CCND2cyclin D2Source|GeneCards
ZFP36L1ZFP36L1zinc finger protein 36, C3H type-like 1Source|GeneCards
FLJ46154FLJ46154FLJ46154 proteinSource|GeneCards
WNT9BWNT9Bwingless-type MMTV integration site family, member 9BSource|GeneCards
FLJ26184C16ORF47chromosome 16 open reading frame 47Source|GeneCards
SP3SP3Sp3 transcription factorSource|GeneCards
ZFPM2ZFPM2zinc finger protein, multitype 2Source|GeneCards
CNOT7CNOT7CCR4-NOT transcription complex, subunit 7Source|GeneCards
C9ORF98C9ORF98chromosome 9 open reading frame 98Source|GeneCards
RARBRARBretinoic acid receptor, betaSource|GeneCards
NOGNOGnogginSource|GeneCards
DUSP10DUSP10dual specificity phosphatase 10Source|GeneCards
LIPCLIPClipase, hepaticSource|GeneCards
STAG2STAG2stromal antigen 2Source|GeneCards
KHDRBS1KHDRBS1KH domain containing, RNA binding, signal transduction associated 1Source|GeneCards
TAB3TAB3TAK1-binding protein 3Source|GeneCards
ABHD3ABHD3abhydrolase domain containing 3Source|GeneCards
MCTS1MCTS1malignant T cell amplified sequence 1Source|GeneCards
GPB5GPHB5glycoprotein hormone beta 5Source|GeneCards
NSD1NSD1nuclear receptor binding SET domain protein 1Source|GeneCards
SIX1SIX1sine oculis homeobox homolog 1 (Drosophila)Source|GeneCards
TLX1TLX1T-cell leukemia, homeobox 1Source|GeneCards
PHACTR3PHACTR3Phosphatase and actin regulator 3Source|GeneCards
IL7IL7interleukin 7Source|GeneCards
MYF6MYF6myogenic factor 6 (herculin)Source|GeneCards
PTHLHPTHLHparathyroid hormone-like hormoneSource|GeneCards
FGF13FGF13fibroblast growth factor 13Source|GeneCards
PPM1DPPM1Dprotein phosphatase 1D magnesium-dependent, delta isoformSource|GeneCards
RIMS2RIMS2regulating synaptic membrane exocytosis 2Source|GeneCards
ONECUT2ONECUT2one cut domain, family member 2Source|GeneCards
HOXD10HOXD10homeo box D10Source|GeneCards
HHEXHHEXhematopoietically expressed homeoboxSource|GeneCards
COL4A4COL4A4collagen, type IV, alpha 4Source|GeneCards
MGC33510C8ORF46chromosome 8 open reading frame 46Source|GeneCards
FLJ32642VPS37Avacuolar protein sorting 37A (yeast)Source|GeneCards
ABCB5ABCB5ATP-binding cassette, sub-family B (MDR/TAP), member 5Source|GeneCards
PABPN1PABPN1poly(A) binding protein, nuclear 1Source|GeneCards
DMDDMDdystrophin (muscular dystrophy, Duchenne and Becker types)Source|GeneCards
TCF21TCF21transcription factor 21Source|GeneCards
TECTATECTAtectorin alphaSource|GeneCards
ZIC1ZIC1Zic family member 1 (odd-paired homolog, Drosophila)Source|GeneCards
TAFA1TAFA1TAFA1 proteinSource|GeneCards
HOXD9HOXD9homeo box D9Source|GeneCards
MR1MR1major histocompatibility complex, class I-relatedSource|GeneCards
HOXA2HOXA2homeo box A2Source|GeneCards
HOXC11HOXC11homeo box C11Source|GeneCards
MTSS1MTSS1metastasis suppressor 1Source|GeneCards
FLJ22875FAM96Afamily with sequence similarity 96, member ASource|GeneCards
VDPVDPvesicle docking protein p115Source|GeneCards
ZIC4ZIC4Zic family member 4Source|GeneCards
KITLGKITLGKIT ligandSource|GeneCards
NOSIPNOSIPnitric oxide synthase interacting proteinSource|GeneCards
EBF2EBF2early B-cell factor 2Source|GeneCards
MGC33211KATNAL2katanin p60 subunit A-like 2Source|GeneCards
SMAD1SMAD1SMAD, mothers against DPP homolog 1 (Drosophila)Source|GeneCards
HOXD13HOXD13homeo box D13Source|GeneCards
SCRT2SCRT2scratch homolog 2, zinc finger protein (Drosophila)Source|GeneCards
SLC2A14SLC2A14solute carrier family 2 (facilitated glucose transporter), member 14Source|GeneCards
RFX4RFX4regulatory factor X, 4 (influences HLA class II expression)Source|GeneCards
TLE1TLE1transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)Source|GeneCards
AMBNAMBNameloblastin, enamel matrix proteinSource|GeneCards
AKAP12AKAP12A kinase (PRKA) anchor protein (gravin) 12Source|GeneCards
HIBADHHIBADH3-hydroxyisobutyrate dehydrogenaseSource|GeneCards
TRIB2TRIB2tribbles homolog 2 (Drosophila)Source|GeneCards
BCL9BCL9B-cell CLL/lymphoma 9Source|GeneCards
SLC43A3SLC43A3solute carrier family 43, member 3Source|GeneCards
SSTSSTsomatostatinSource|GeneCards
GNAO1GNAO1guanine nucleotide binding protein (G protein), alpha activating activity polypeptide OSource|GeneCards
FLJ40869FLJ40869hypothetical protein FLJ40869Source|GeneCards
LIFLIFleukemia inhibitory factor (cholinergic differentiation factor)Source|GeneCards
TBL1XTBL1Xtransducin (beta)-like 1X-linkedSource|GeneCards
CYB5R2CYB5R2cytochrome b5 reductase b5R.2Source|GeneCards
PAX3PAX3paired box gene 3 (Waardenburg syndrome 1)Source|GeneCards
THRATHRAthyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)Source|GeneCards
COL4A3COL4A3collagen, type IV, alpha 3 (Goodpasture antigen)Source|GeneCards
OTPOTPorthopedia homolog (Drosophila)Source|GeneCards
LMOD1LMOD1leiomodin 1 (smooth muscle)Source|GeneCards
MNABMNABmembrane associated DNA binding proteinSource|GeneCards
MMP1MMP1matrix metalloproteinase 1 (interstitial collagenase)Source|GeneCards
USP47USP47ubiquitin specific protease 47Source|GeneCards
PRLPRLprolactinSource|GeneCards
FGF8FGF8fibroblast growth factor 8 (androgen-induced)Source|GeneCards
SHRMLSHRMLShroom-related proteinSource|GeneCards
MRPS6MRPS6mitochondrial ribosomal protein S6Source|GeneCards
SMC6L1SMC6L1SMC6 structural maintenance of chromosomes 6-like 1 (yeast)Source|GeneCards
RHOBRHOBras homolog gene family, member BSource|GeneCards
MEF2CMEF2CMADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)Source|GeneCards
OTX2OTX2orthodenticle homolog 2 (Drosophila)Source|GeneCards
RPA3RPA3replication protein A3, 14kDaSource|GeneCards
OA48-18
GRIK4GRIK4glutamate receptor, ionotropic, kainate 4Source|GeneCards
RNF128RNF128ring finger protein 128Source|GeneCards
PNOCPNOCprepronociceptinSource|GeneCards
FUT11FUT11fucosyltransferase 11 (alpha (1,3) fucosyltransferase)Source|GeneCards


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