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Gene set: V$RORA1_01 (C3:TFAC:0099)
Standard nameV$RORA1_01
Systematic nameC3:TFAC:0099
Brief descriptionGenes with 3'UTR containing motif NWAWNNAGGTCAN which matches annotation for RORA: RAR-related orphan receptor A
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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XX
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FA RORalpha1
XX
SY RAR-related orphan receptor alpha1; NR1F1.
XX
OS human, Homo sapiens
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; primates
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XX
CL C0002; CC (rec); 2.1.2.9.2.1.
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SZ 523 AA; 59.0 kDa (cDNA)
XX
XX
SC translated from EMBL #U04897
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FT 70 141 SM00399; ZnF_C4.
FT 71 146 PF00105; zf-C4.
FT 73 139 DNA-binding domain (by similarity).
FT 272 523 putative ligand-binding domain (by analogy).
FT 325 481 SM00430; HOLI.
FT 328 511 PF00104; hormone_rec.
XX
FF belongs to small group of orphan nuclear receptors which bind to DNA as
FF monomers and recognizes additional nucleotides upstream of the hexameric
FF half-site (most often AGGTCA motif) [1]
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XX
XX
XX
RN [1]; RE0015434.
RX MEDLINE; 20493544.
RA Ito M., Achermann J. C., Jameson J. L.
RT A naturally occurring steroidogenic factor-1 mutation exhibits differential
RT binding and activation of target genes
RL J. Biol. Chem. 275:31708-31714 (2000).
RN [2]; RE0013625.
RX MEDLINE; 99235977.
RA Nuclear Receptors Nomenclature Committee.
RT A unified nomenclature system for the nuclear receptor superfamily
RL Cell 97:161-163 (1999).
RN [3]; RE0003124.
RX MEDLINE; 95011560.
RA Giguere V., Tini M., Flock G., Ong E., Evans R. M., Otulakowski G.
RT Isoform-specific amino-terminal domains dictate DNA-binding properties of
RT RORalpha, a novel family of orphan hormone nuclear receptors
RL Genes Dev. 8:538-553 (1994).
XX
Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

251 genes, 251 accessions (Toggle view)

AccessionGeneTitleLinks
MSI2MSI2musashi homolog 2 (Drosophila)Source|GeneCards
LOC283807FBXL22F-box and leucine-rich repeat protein 22Source|GeneCards
RTN3RTN3reticulon 3Source|GeneCards
C4ORF11C4ORF11chromosome 4 open reading frame 11Source|GeneCards
KHDRBS2KHDRBS2KH domain containing, RNA binding, signal transduction associated 2Source|GeneCards
NFYANFYAnuclear transcription factor Y, alphaSource|GeneCards
CNTFCNTFciliary neurotrophic factorSource|GeneCards
PITPNM1PITPNM1phosphatidylinositol transfer protein, membrane-associated 1Source|GeneCards
NTF3NTF3neurotrophin 3Source|GeneCards
SLC18A2SLC18A2solute carrier family 18 (vesicular monoamine), member 2Source|GeneCards
ESPNESPNespinSource|GeneCards
LMO3LMO3LIM domain only 3 (rhombotin-like 2)Source|GeneCards
IL17REIL17REinterleukin 17 receptor ESource|GeneCards
PIM1PIM1pim-1 oncogeneSource|GeneCards
ANGPT1ANGPT1angiopoietin 1Source|GeneCards
NRP1NRP1Neuropilin 1Source|GeneCards
NRLNRLneural retina leucine zipperSource|GeneCards
GABARAPL1GABARAPL1GABA(A) receptor-associated protein like 1Source|GeneCards
ADCYAP1ADCYAP1adenylate cyclase activating polypeptide 1 (pituitary)Source|GeneCards
YWHAQYWHAQtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptideSource|GeneCards
TPM3TPM3tropomyosin 3Source|GeneCards
CKLFSF6CKLFSF6chemokine-like factor super family 6Source|GeneCards
SORCS1SORCS1VPS10 domain receptor protein SORCS 1Source|GeneCards
LOC55580LOC55580hypothetical protein LOC55580Source|GeneCards
ATP6AP2ATP6AP2ATPase, H+ transporting, lysosomal accessory protein 2Source|GeneCards
IL22IL22interleukin 22Source|GeneCards
FLJ38736WDR72WD repeat domain 72Source|GeneCards
LOC285513LOC285513hypothetical protein LOC285513Source|GeneCards
PACSIN1PACSIN1protein kinase C and casein kinase substrate in neurons 1Source|GeneCards
ZDHHC21ZDHHC21zinc finger, DHHC domain containing 21Source|GeneCards
ARXARXaristaless related homeoboxSource|GeneCards
RG9MTD2RG9MTD2RNA (guanine-9-) methyltransferase domain containing 2Source|GeneCards
DTNADTNAdystrobrevin, alphaSource|GeneCards
HOXA3HOXA3homeo box A3Source|GeneCards
ACOXLACOXLacyl-Coenzyme A oxidase-likeSource|GeneCards
USP8USP8ubiquitin specific protease 8Source|GeneCards
IL17FIL17Finterleukin 17FSource|GeneCards
URG4URG4up-regulated gene 4Source|GeneCards
CACNB2CACNB2calcium channel, voltage-dependent, beta 2 subunitSource|GeneCards
GPR23GPR23G protein-coupled receptor 23Source|GeneCards
IHPK2IHPK2inositol hexaphosphate kinase 2Source|GeneCards
DTNBDTNBdystrobrevin, betaSource|GeneCards
STAC2STAC2SH3 and cysteine rich domain 2Source|GeneCards
KRT9KRT9keratin 9 (epidermolytic palmoplantar keratoderma)Source|GeneCards
NOL4NOL4nucleolar protein 4Source|GeneCards
ELAVL4ELAVL4ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)Source|GeneCards
LDB2LDB2LIM domain binding 2Source|GeneCards
HSPE1HSPE1heat shock 10kDa protein 1 (chaperonin 10)Source|GeneCards
SUCLA2SUCLA2succinate-CoA ligase, ADP-forming, beta subunitSource|GeneCards
SOCS4SOCS4Suppressor of cytokine signaling 4Source|GeneCards
SLC8A3SLC8A3solute carrier family 8 (sodium-calcium exchanger), member 3Source|GeneCards
PCDH18PCDH18protocadherin 18Source|GeneCards
ABHD3ABHD3abhydrolase domain containing 3Source|GeneCards
EFNA3EFNA3ephrin-A3Source|GeneCards
C17ORF39C17ORF39chromosome 17 open reading frame 39Source|GeneCards
MRPL27MRPL27mitochondrial ribosomal protein L27Source|GeneCards
SHFM3FBXW4F-box and WD-40 domain protein 4Source|GeneCards
IL7IL7interleukin 7Source|GeneCards
FLJ44313FLJ44313FLJ44313 proteinSource|GeneCards
PPP2CAPPP2CAprotein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoformSource|GeneCards
FBXW7FBXW7F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila)Source|GeneCards
FSBPFSBPfibrinogen silencer binding proteinSource|GeneCards
TAO1TAOK2TAO kinase 2Source|GeneCards
GLIGLI1glioma-associated oncogene homolog 1 (zinc finger protein)Source|GeneCards
ZNF216ZA20D2zinc finger, A20 domain containing 2Source|GeneCards
CIP29CIP29cytokine induced protein 29 kDaSource|GeneCards
CTHCTHcystathionase (cystathionine gamma-lyase)Source|GeneCards
EPHA7EPHA7EphA7Source|GeneCards
NDRG2NDRG2NDRG family member 2Source|GeneCards
CNTN2CNTN2contactin 2 (axonal)Source|GeneCards
MCCMCCmutated in colorectal cancersSource|GeneCards
CHRDL1CHRDL1chordin-like 1Source|GeneCards
NFATC3NFATC3nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3Source|GeneCards
NAP5NAP5Nck-associated protein 5Source|GeneCards
ZNF342ZNF342zinc finger protein 342Source|GeneCards
TNRC6TNRC6ATrinucleotide repeat containing 6ASource|GeneCards
LCN2LCN2lipocalin 2 (oncogene 24p3)Source|GeneCards
DBPDBPD site of albumin promoter (albumin D-box) binding proteinSource|GeneCards
GRM1GRM1glutamate receptor, metabotropic 1Source|GeneCards
CSADCSADcysteine sulfinic acid decarboxylaseSource|GeneCards
ZRANB1ZRANB1zinc finger, RAN-binding domain containing 1Source|GeneCards
SPAG9SPAG9sperm associated antigen 9Source|GeneCards
MYBMYBv-myb myeloblastosis viral oncogene homolog (avian)Source|GeneCards
SPTAN1SPTAN1spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)Source|GeneCards
PBXIP1PBXIP1pre-B-cell leukemia transcription factor interacting protein 1Source|GeneCards
SCMH1SCMH1sex comb on midleg homolog 1 (Drosophila)Source|GeneCards
ATP8B2ATP8B2ATPase, Class I, type 8B, member 2Source|GeneCards
SCOTINSCOTINscotinSource|GeneCards
JARID2JARID2Jumonji, AT rich interactive domain 2Source|GeneCards
AFG3L2AFG3L2AFG3 ATPase family gene 3-like 2 (yeast)Source|GeneCards
AMY2AAMY2Aamylase, alpha 2A; pancreaticSource|GeneCards
HIST1H4CHIST1H4Chistone 1, H4cSource|GeneCards
NPAS2NPAS2neuronal PAS domain protein 2Source|GeneCards
UBL3UBL3ubiquitin-like 3Source|GeneCards
B3GALT2B3GALT2UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2Source|GeneCards
SMPXSMPXsmall muscle protein, X-linkedSource|GeneCards
BCL9BCL9B-cell CLL/lymphoma 9Source|GeneCards
TCF7TCF7transcription factor 7 (T-cell specific, HMG-box)Source|GeneCards
FLJ22471FLJ22471limkain beta 2Source|GeneCards
MRVI1MRVI1murine retrovirus integration site 1 homologSource|GeneCards
AP3D1AP3D1adaptor-related protein complex 3, delta 1 subunitSource|GeneCards
RBMS1RBMS1RNA binding motif, single stranded interacting protein 1Source|GeneCards
C20ORF98C20ORF98chromosome 20 open reading frame 98Source|GeneCards
YTHDF2YTHDF2YTH domain family, member 2Source|GeneCards
FLJ39155FLJ39155hypothetical protein FLJ39155Source|GeneCards
GRIA1GRIA1glutamate receptor, ionotropic, AMPA 1Source|GeneCards
FLJ14084TMEM35transmembrane protein 35Source|GeneCards
ENO3ENO3enolase 3, (beta, muscle)Source|GeneCards
ERN1ERN1ER to nucleus signalling 1Source|GeneCards
SHHSHHsonic hedgehog homolog (Drosophila)Source|GeneCards
TTLTTLtubulin-tyrosine ligaseSource|GeneCards
C21ORF29C21ORF29chromosome 21 open reading frame 29Source|GeneCards
TIMM9TIMM9translocase of inner mitochondrial membrane 9 homolog (yeast)Source|GeneCards
NEF3NEF3neurofilament 3 (150kDa medium)Source|GeneCards
CNTFRCNTFRciliary neurotrophic factor receptorSource|GeneCards
VASPVASPvasodilator-stimulated phosphoproteinSource|GeneCards
ARL6IPARL6IPADP-ribosylation factor-like 6 interacting proteinSource|GeneCards
EXTL2EXTL2exostoses (multiple)-like 2Source|GeneCards
DACT1DACT1dapper homolog 1, antagonist of beta-catenin (xenopus)Source|GeneCards
FBXO30FBXO30F-box protein 30Source|GeneCards
COLQCOLQcollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesteraseSource|GeneCards
FLJ13089FLJ13089hypothetical protein FLJ13089Source|GeneCards
SYNE1SYNE1spectrin repeat containing, nuclear envelope 1Source|GeneCards
CHST1CHST1carbohydrate (keratan sulfate Gal-6) sulfotransferase 1Source|GeneCards
SLASLASrc-like-adaptorSource|GeneCards
EME1EME1essential meiotic endonuclease 1 homolog 1 (S. pombe)Source|GeneCards
RGS6RGS6regulator of G-protein signalling 6Source|GeneCards
KIAA1221ZNF644Zinc finger protein 644Source|GeneCards
NAV1NAV1neuron navigator 1Source|GeneCards
FLJ13725FAM65Afamily with sequence similarity 65, member ASource|GeneCards
VAMP1VAMP1vesicle-associated membrane protein 1 (synaptobrevin 1)Source|GeneCards
HSPD1HSPD1heat shock 60kDa protein 1 (chaperonin)Source|GeneCards
JMJD1BJMJD1Bjumonji domain containing 1BSource|GeneCards
ARNTLARNTLaryl hydrocarbon receptor nuclear translocator-likeSource|GeneCards
MPP3MPP3membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)Source|GeneCards
IVNS1ABPIVNS1ABPinfluenza virus NS1A binding proteinSource|GeneCards
STK38STK38serine/threonine kinase 38Source|GeneCards
C6ORF130C6ORF130chromosome 6 open reading frame 130Source|GeneCards
ALS2CR2ALS2CR2amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2Source|GeneCards
ATPAF2ATPAF2ATP synthase mitochondrial F1 complex assembly factor 2Source|GeneCards
SAGSAGS-antigen; retina and pineal gland (arrestin)Source|GeneCards
ODC-PODC-Pornithine decarboxylase-likeSource|GeneCards
GALTGALTgalactose-1-phosphate uridylyltransferaseSource|GeneCards
NELL2NELL2NEL-like 2 (chicken)Source|GeneCards
FLJ10826FLJ10826hypothetical protein FLJ10826Source|GeneCards
SOCS2SOCS2suppressor of cytokine signaling 2Source|GeneCards
PLA2G5PLA2G5phospholipase A2, group VSource|GeneCards
CALCACALCAcalcitonin/calcitonin-related polypeptide, alphaSource|GeneCards
CXXC5CXXC5CXXC finger 5Source|GeneCards
KIF5AKIF5Akinesin family member 5ASource|GeneCards
TM4SF2TM4SF2transmembrane 4 superfamily member 2Source|GeneCards
VAMP2VAMP2vesicle-associated membrane protein 2 (synaptobrevin 2)Source|GeneCards
PSIP1PSIP1PC4 and SFRS1 interacting protein 1Source|GeneCards
HOXB3HOXB3homeo box B3Source|GeneCards
NEO1NEO1neogenin homolog 1 (chicken)Source|GeneCards
GTF2IRD1GTF2IRD1GTF2I repeat domain containing 1Source|GeneCards
CHD2CHD2chromodomain helicase DNA binding protein 2Source|GeneCards
CX3CL1CX3CL1chemokine (C-X3-C motif) ligand 1Source|GeneCards
SLC4A7SLC4A7solute carrier family 4, sodium bicarbonate cotransporter, member 7Source|GeneCards
FLJ31166FLJ31166hypothetical protein FLJ31166Source|GeneCards
SATB1SATB1special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA's)Source|GeneCards
KIAA1002KIAA1002KIAA1002 proteinSource|GeneCards
ZFP36L1ZFP36L1zinc finger protein 36, C3H type-like 1Source|GeneCards
BZW2BZW2basic leucine zipper and W2 domains 2Source|GeneCards
KCNAB3KCNAB3potassium voltage-gated channel, shaker-related subfamily, beta member 3Source|GeneCards
MYLKMYLKmyosin, light polypeptide kinaseSource|GeneCards
RAB3ARAB3ARAB3A, member RAS oncogene familySource|GeneCards
KIAA0276DCUN1D4DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)Source|GeneCards
HCN1HCN1hyperpolarization activated cyclic nucleotide-gated potassium channel 1Source|GeneCards
ATP6V1AATP6V1AATPase, H+ transporting, lysosomal 70kDa, V1 subunit ASource|GeneCards
KIAA0586KIAA0586KIAA0586Source|GeneCards
ESRRBESRRBestrogen-related receptor betaSource|GeneCards
NOGNOGnogginSource|GeneCards
MYL3MYL3myosin, light polypeptide 3, alkali; ventricular, skeletal, slowSource|GeneCards
GKGKGlycerol kinaseSource|GeneCards
CAMKK2CAMKK2calcium/calmodulin-dependent protein kinase kinase 2, betaSource|GeneCards
TAB3TAB3TAK1-binding protein 3Source|GeneCards
M-RIPM-RIPmyosin phosphatase-Rho interacting proteinSource|GeneCards
NR2F2NR2F2Nuclear receptor subfamily 2, group F, member 2Source|GeneCards
JMJD1CJMJD1Cjumonji domain containing 1CSource|GeneCards
SPOCK2SPOCK2sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2Source|GeneCards
KIAA0555KIAA0555KIAA0555 gene productSource|GeneCards
MATKMATKmegakaryocyte-associated tyrosine kinaseSource|GeneCards
A2BP1A2BP1ataxin 2-binding protein 1Source|GeneCards
ATP5J2ATP5J2ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2Source|GeneCards
SNTG1SNTG1syntrophin, gamma 1Source|GeneCards
CYP39A1CYP39A1cytochrome P450, family 39, subfamily A, polypeptide 1Source|GeneCards
FLI1FLI1Friend leukemia virus integration 1Source|GeneCards
ONECUT2ONECUT2one cut domain, family member 2Source|GeneCards
SLC22A6SLC22A6solute carrier family 22 (organic anion transporter), member 6Source|GeneCards
ATP1B4ATP1B4ATPase, (Na+)/K+ transporting, beta 4 polypeptideSource|GeneCards
GPR161GPR161G protein-coupled receptor 161Source|GeneCards
HSPA9BHSPA9Bheat shock 70kDa protein 9B (mortalin-2)Source|GeneCards
FLJ13842ZMAT4zinc finger, matrin type 4Source|GeneCards
TRAP1TRAP1TNF receptor-associated protein 1Source|GeneCards
SLC25A27SLC25A27solute carrier family 25, member 27Source|GeneCards
PHF5APHF5APHD finger protein 5ASource|GeneCards
SEMA3FSEMA3Fsema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3FSource|GeneCards
C9ORF39C9ORF39chromosome 9 open reading frame 39Source|GeneCards
HDAC9HDAC9histone deacetylase 9Source|GeneCards
MLLT6MLLT6myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6Source|GeneCards
RASA4RASA4RAS p21 protein activator 4Source|GeneCards
KIAA1727KIAA1727KIAA1727 proteinSource|GeneCards
FLJ39779FLJ39779FLJ39779 proteinSource|GeneCards
RNF12RNF12ring finger protein 12Source|GeneCards
GEMIN7GEMIN7gem (nuclear organelle) associated protein 7Source|GeneCards
ACO2ACO2aconitase 2, mitochondrialSource|GeneCards
C6ORF152C6ORF152chromosome 6 open reading frame 152Source|GeneCards
STAUSTAUstaufen, RNA binding protein (Drosophila)Source|GeneCards
ABATABAT4-aminobutyrate aminotransferaseSource|GeneCards
STEAP2STEAP2six transmembrane epithelial antigen of prostate 2Source|GeneCards
STARSSTARSstriated muscle activator of Rho-dependent signalingSource|GeneCards
AOC2AOC2amine oxidase, copper containing 2 (retina-specific)Source|GeneCards
RYR1RYR1ryanodine receptor 1 (skeletal)Source|GeneCards
VNN3VNN3vanin 3Source|GeneCards
RCOR1RCOR1REST corepressor 1Source|GeneCards
CACNA1ACACNA1Acalcium channel, voltage-dependent, P/Q type, alpha 1A subunitSource|GeneCards
GRIK3GRIK3glutamate receptor, ionotropic, kainate 3Source|GeneCards
PKP3PKP3plakophilin 3Source|GeneCards
ITGAXITGAXintegrin, alpha X (antigen CD11C (p150), alpha polypeptide)Source|GeneCards
FGF9FGF9fibroblast growth factor 9 (glia-activating factor)Source|GeneCards
MPP6MPP6membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)Source|GeneCards
CNTN6CNTN6contactin 6Source|GeneCards
UHRF2UHRF2ubiquitin-like, containing PHD and RING finger domains, 2Source|GeneCards
UBADC1UBADC1ubiquitin associated domain containing 1Source|GeneCards
ACSL4ACSL4acyl-CoA synthetase long-chain family member 4Source|GeneCards
DKFZP564B167BRP44brain protein 44Source|GeneCards
KIAA1318RGAG1retrotransposon gag domain containing 1Source|GeneCards
MAK3MAK3Mak3 homolog (S. cerevisiae)Source|GeneCards
ARF6ARF6ADP-ribosylation factor 6Source|GeneCards
RSNRSNrestin (Reed-Steinberg cell-expressed intermediate filament-associated protein)Source|GeneCards
KIAA2010KIAA2010KIAA2010Source|GeneCards
TTBK2TTBK2tau tubulin kinase 2Source|GeneCards
USH3AUSH3AUsher syndrome 3ASource|GeneCards
SOX15SOX15SRY (sex determining region Y)-box 15Source|GeneCards
MEF2CMEF2CMADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)Source|GeneCards
LOC159090LOC159090similar to hypothetical protein MGC17347Source|GeneCards
IBRDC2IBRDC2IBR domain containing 2Source|GeneCards
ATP5G1ATP5G1ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1Source|GeneCards
PPP2R5DPPP2R5Dprotein phosphatase 2, regulatory subunit B (B56), delta isoformSource|GeneCards
ASPHASPHaspartate beta-hydroxylaseSource|GeneCards
CAMK2BCAMK2Bcalcium/calmodulin-dependent protein kinase (CaM kinase) II betaSource|GeneCards
PCDH21PCDH21protocadherin 21Source|GeneCards
RASAL1RASAL1RAS protein activator like 1 (GAP1 like)Source|GeneCards
CREB1CREB1cAMP responsive element binding protein 1Source|GeneCards
LARGELARGElike-glycosyltransferaseSource|GeneCards
BTBD3BTBD3BTB (POZ) domain containing 3Source|GeneCards
KIAA1441ZNF687zinc finger protein 687Source|GeneCards
AFTIPHILINAFTIPHILINaftiphilin proteinSource|GeneCards
ATP1B2ATP1B2ATPase, Na+/K+ transporting, beta 2 polypeptideSource|GeneCards
INM01C8ORF42chromosome 8 open reading frame 42Source|GeneCards


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