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Gene set: TTGCWCAAY_V$CEBPB_02 (C3:REPM:0122)
Standard nameTTGCWCAAY_V$CEBPB_02
Systematic nameC3:REPM:0122
Brief descriptionGenes with 3'UTR containing motif TTGCWCAAY which matches annotation for CEBPB: CCAAT/enhancer binding protein (C/EBP), beta
CategoryC3: Motif
Sub-categoryREPM: Representative motifs
Full description or Abstract

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FA C/EBPbeta
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SY AGP/EBP; ANF-2; C/EBPbeta; CRP2; H-APF-2; IL-6DBP; LAP; LAP1; NF-IL6; NF-M;
SY C/EBP-beta.
XX
OS human, Homo sapiens
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; primates
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CL C0008; bZIP; 1.1.3.0.2.1.
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SZ 345 AA; 36.1 kDa (cDNA)
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SC SwissProt #P17676
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FT 9 19 proline-rich region (7/11).
FT 46 59 proline-rich region (7/14).
FT 81 108 proline-rich region (9/28).
FT 154 181 proline-rich region (13/28).
FT 218 237 serine-rich region (10/14).
FT 235 235 Thr-phosphorylation by MAP kinases [5].
FT 260 295 basic region.
FT 266 272 complex stabilizing subdomain [2].
FT 266 345 tryptic core domain within DNA complex [2].
FT 269 333 PF00170; bZIP.
FT 269 333 SM00338; BRLZ.
FT 299 334 leucine zipper (TL5).
FT 303 345 tryptic core domain.
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SF very relaxed DNA-binding specificity, may even bind to AP-1 sites and may
SF heterodimerize with either c-Fos or c-Jun [3];
SF the leucine zipper motif may also interact with the Rel-domain of
SF NF-kappaB1 (p50) thus causing synergistic effects of both factors [7] [6];
SF interaction with hypophosphorylated Rb protein enhances DNA-binding and
SF trans-activation [1];
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CP widespread; most abundant in spleen; liver, kidney after stimulation [9];
CP myeloid cells
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FF transcriptional activator in vitro and in vivo [9];
FF involved in acute phase reactions, inflammation and haematopoiesis;
FF induced by IL-1, IL-6, LPS [9];
FF master regulator of the acute-phase response [9];
FF regulates constitutive as well as IL-1-induced transcription of IL-6 [9];
FF at the IL-6 promoter, it acts antagonistically to the p53 tumor suppressor
FF [4];
FF protein is abundant in liver due to posttranscriptional regulation [9];
FF phosphorylation by p21(ras)-dependent MAP kinases enhances transcriptional
FF activation [5];
FF trans-activation is repressed by association with c-Fos or c-Jun [3];
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IN T01303; ATF4; human, Homo sapiens.
IN T00123; c-Fos; human, Homo sapiens.
IN T00133; c-Jun; human, Homo sapiens.
IN T00105; C/EBPalpha; human, Homo sapiens.
IN T00108; C/EBPalpha; rat, Rattus norvegicus.
IN T00109; C/EBPdelta; rat, Rattus norvegicus.
IN T00583; C/EBPdelta; human, Homo sapiens.
IN T01114; C/EBPdelta; mouse, Mus musculus.
IN T00127; CHOP-10; mouse, Mus musculus.
IN T00593; NF-kappaB1; human, Homo sapiens.
IN T00722; pRb; human, Homo sapiens.
IN T00594; RelA; human, Homo sapiens.
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RN [1]; RE0006633.
RX MEDLINE; 96133958.
RA Chen P.-L., Riley D. J., Chen-Kiang S., Lee W.-H.
RT Retinoblastoma protein directly interacts with and activates the
RT transcription factor NF-IL6
RL Proc. Natl. Acad. Sci. USA 93:465-469 (1996).
RN [2]; RE0001110.
RX MEDLINE; 94193722.
RA Brasier A. R., Kumar A.
RT Identification of a novel determinant for basic domain-leucine zipper DNA
RT binding activity in the acute-phase inducible nuclear factor-interleukin-6
RT transcription factor
RL J. Biol. Chem. 269:10341-10351 (1994).
RN [3]; RE0004730.
RX MEDLINE; 94088523.
RA Hsu W., Kerppola T. K., Chen P.-L., Curran T., Chen-Kiang S.
RT Fos and Jun repress transcription activation by NF-IL6 through association
RT at the basic zipper region
RL Mol. Cell. Biol. 14:268-276 (1994).
RN [4]; RE0003029.
RX MEDLINE; 93315489.
RA Margulies L., Sehgal P. B.
RT Modulation of the human interleukin-6 promoter (IL-6) and transcription
RT factor C/EBPbeta (NF-IL-6) activity by p53 species
RL J. Biol. Chem. 268:15096-15100 (1993).
RN [5]; RE0003030.
RX MEDLINE; 93211931.
RA Nakajima T., Kinoshita S., Sasagawa T., Sasaki K., Naruto M., Kishimoto T.,
RA Akira S.
RT Phosphorylation at threonine-235 by ras-dependent mitogen-activated protein
RT kinase cascade is essential for transcription factor NF-IL6
RL Proc. Natl. Acad. Sci. USA 90:2207-2211 (1993).
RN [6]; RE0006254.
RX MEDLINE; 94052130.
RA Matsusaka T., Fujikawa K., Nishio Y., Mukaida N., Matsushima K., Kishimoto
RA T., Akira S.
RT Transcription factors NF-IL6 and NF-kappaB synergistically activate
RT transcription of the inflammatory cytokines interleukin 6 and interleukin 8
RL Proc. Natl. Acad. Sci. USA 90:10193-10197 (1993).
RN [7]; RE0004517.
RX MEDLINE; 92390404.
RA LeClair K. P., Blanar M. A., Sharp P. A.
RT The p50 subunit of NF-kappaB associates with the NF-IL6 transcription factor
RL Proc. Natl. Acad. Sci. USA 89:8145-8149 (1992).
RN [8]; RE0001943.
RX MEDLINE; 91248826.
RA Isshiki H., Akira S., Sugita T., Nishio Y., Hashimoto S., Pawlowski T.,
RA Suematsu S., Kishimoto T.
RT Reciprocal expression of NF-IL6 and C/EBP in hepatocytes: possible
RT involvement of NF-IL6 in acute phase protein gene expression
RL New Biol. 3:63-70 (1991).
RN [9]; RE0000469.
RX MEDLINE; 90269225.
RA Akira S., Isshiki H., Sugita T., Tanabe O., Kinoshita S., Nishio Y.,
RA Nakajima T., Hirano T., Kishimoto T.
RT A nuclear factor for IL-6 expression (NF-IL6) is a member of a C/EBP family
RL EMBO J. 9:1897-1906 (1990).
RN [10]; RE0003187.
RX MEDLINE; 90258863.
RA Isshiki H., Akira S., Tanabe O., Nakajima T., Shimamoto T., Hirano T.,
RA Kishimoto T.
RT Constitutive and Interleukin-1 (IL-1)-Inducible Factors Interact with the
RT IL-1-Responsive Element in the IL-6 Gene
RL Mol. Cell. Biol. 10:2757-2764 (1990).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

64 genes, 64 accessions (Toggle view)

AccessionGeneTitleLinks
MSH5MSH5mutS homolog 5 (E. coli)Source|GeneCards
WNT5AWNT5Awingless-type MMTV integration site family, member 5ASource|GeneCards
MAPK14MAPK14mitogen-activated protein kinase 14Source|GeneCards
CXORF15CXORF15chromosome X open reading frame 15Source|GeneCards
FGAFGAfibrinogen, A alpha polypeptideSource|GeneCards
FLJ20255FLJ20255hypothetical protein FLJ20255Source|GeneCards
DKFZP564C103NAT9N-acetyltransferase 9Source|GeneCards
KIAA0999KIAA0999KIAA0999 proteinSource|GeneCards
SLIT3SLIT3slit homolog 3 (Drosophila)Source|GeneCards
TOB1TOB1transducer of ERBB2, 1Source|GeneCards
HOXA5HOXA5homeo box A5Source|GeneCards
IL19IL19interleukin 19Source|GeneCards
AGC1AGC1aggrecan 1 (chondroitin sulfate proteoglycan 1, large aggregating proteoglycan, antigen identified by monoclonal antibody A0122)Source|GeneCards
SERPINE1SERPINE1serine (or cysteine) proteinase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1Source|GeneCards
CYP24A1CYP24A1cytochrome P450, family 24, subfamily A, polypeptide 1Source|GeneCards
ANGPT1ANGPT1angiopoietin 1Source|GeneCards
TRIB1TRIB1tribbles homolog 1 (Drosophila)Source|GeneCards
PRDX3PRDX3peroxiredoxin 3Source|GeneCards
KRT23KRT23keratin 23 (histone deacetylase inducible)Source|GeneCards
SPIBSPIBSpi-B transcription factor (Spi-1/PU.1 related)Source|GeneCards
PITX2PITX2paired-like homeodomain transcription factor 2Source|GeneCards
SYNCRIPSYNCRIPsynaptotagmin binding, cytoplasmic RNA interacting proteinSource|GeneCards
PPLPPLperiplakinSource|GeneCards
SAA1SAA1serum amyloid A1Source|GeneCards
SLC7A11SLC7A11solute carrier family 7, (cationic amino acid transporter, y+ system) member 11Source|GeneCards
CKAP4CKAP4cytoskeleton-associated protein 4Source|GeneCards
UNQ698UNQ698HLAR698Source|GeneCards
PHF16PHF16PHD finger protein 16Source|GeneCards
B4GALT1B4GALT1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1Source|GeneCards
CLDN10CLDN10claudin 10Source|GeneCards
SRPK1SRPK1SFRS protein kinase 1Source|GeneCards
PC326IQWD1Glycine cleavage system protein H (aminomethyl carrier)Source|GeneCards
PPP1R3DPPP1R3Dprotein phosphatase 1, regulatory subunit 3DSource|GeneCards
FLJ22457DENND2DDENN/MADD domain containing 2DSource|GeneCards
DBHDBHdopamine beta-hydroxylase (dopamine beta-monooxygenase)Source|GeneCards
NRP2NRP2neuropilin 2Source|GeneCards
D1S155ECSDE1cold shock domain containing E1, RNA-bindingSource|GeneCards
SOX10SOX10SRY (sex determining region Y)-box 10Source|GeneCards
ETV6ETV6ets variant gene 6 (TEL oncogene)Source|GeneCards
BMFBMFBcl-2 modifying factorSource|GeneCards
ZFP36L1ZFP36L1zinc finger protein 36, C3H type-like 1Source|GeneCards
C20ORF177C20ORF177chromosome 20 open reading frame 177Source|GeneCards
KCNJ2KCNJ2potassium inwardly-rectifying channel, subfamily J, member 2Source|GeneCards
KLF5KLF5Kruppel-like factor 5 (intestinal)Source|GeneCards
LUZP1LUZP1leucine zipper protein 1Source|GeneCards
CITED4CITED4Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4Source|GeneCards
IHPK2IHPK2inositol hexaphosphate kinase 2Source|GeneCards
CSPG2CSPG2chondroitin sulfate proteoglycan 2 (versican)Source|GeneCards
RAB2RAB2RAB2, member RAS oncogene familySource|GeneCards
C14ORF43C14ORF43chromosome 14 open reading frame 43Source|GeneCards
CEBPBCEBPBCCAAT/enhancer binding protein (C/EBP), betaSource|GeneCards
ZNF217ZNF217zinc finger protein 217Source|GeneCards
BNC2BNC2basonuclin 2Source|GeneCards
FGF14FGF14fibroblast growth factor 14Source|GeneCards
R-SPONDINR-SPONDINR-spondin homolog (Xenopus laevis)Source|GeneCards
RHOBRHOBras homolog gene family, member BSource|GeneCards
NFKBIENFKBIEnuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilonSource|GeneCards
GSRGSRglutathione reductaseSource|GeneCards
CUEDC1CUEDC1CUE domain containing 1Source|GeneCards
EIF4A1EIF4A1eukaryotic translation initiation factor 4A, isoform 1Source|GeneCards
IDH1IDH1isocitrate dehydrogenase 1 (NADP+), solubleSource|GeneCards
STMN1STMN1stathmin 1/oncoprotein 18Source|GeneCards
EIF4A2EIF4A2eukaryotic translation initiation factor 4A, isoform 2Source|GeneCards
ITPR3ITPR3inositol 1,4,5-triphosphate receptor, type 3Source|GeneCards


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