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Gene set: V$PAX8_01 (C3:TFAC:0340)
Standard nameV$PAX8_01
Systematic nameC3:TFAC:0340
Brief descriptionGenes with 3'UTR containing motif NNNTNNNGNGTGANN which matches annotation for PAX8: paired box gene 8
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract
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FA Pax-8
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SY PAX8; zPax8.
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OS zebra fish, Brachydanio rerio
OC eukaryota; animalia; metazoa; chordata; vertebrata; osteichthyes;
OC actinopterygii; cypriniformes; cyprinoidei; cyprinidae
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CL C0017; paired.
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SZ >429 AA; >45.7 kDa (cDNA)
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SC translated from EMBL #AF072549
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FT 1 116 part of paired domain.
FT 1 113 PF00292; PAX.
FT 1 113 SM00351; PAX.
FT 156 163 conserved octapeptide.
FT 196 223 partial homeo domain.
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SF Pax-8 represents the earliest known marker for the development of the otic
SF system both in fish and mammals [1];
SF Pax2/5/8 have overlapping expression patterns [1];
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CP (embryo >8 h:) midbrain-hindbrain boundary, (embryo stage 3-12:) otic
CP placode primordium, (embryo stage 10-27:) pronephros, nephric ducts,
CP (embryo >stage 20:) retina [1]
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FF involved (together with Pax-2/5) in the formation of the midbrain-hindbrain
FF boundary [1]
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RN [1]; RE0014326.
RX MEDLINE; 98337826.
RA Pfeffer P. L., Gerster T., Lun K., Brand M., Busslinger M.
RT Characterization of three novel members of the zebrafish Pax2/5/8 family:
RT dependency of Pax5 and Pax8 expression on the Pax2.1 (noi) function
RL Development 125:3063-3074 (1998).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

39 genes, 39 accessions (Toggle view)

AccessionGeneTitleLinks
MAB21L2MAB21L2mab-21-like 2 (C. elegans)Source|GeneCards
AHCYL1AHCYL1S-adenosylhomocysteine hydrolase-like 1Source|GeneCards
MGC45441CCDC23coiled-coil domain containing 23Source|GeneCards
CITED2CITED2Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2Source|GeneCards
HRHRhairless homolog (mouse)Source|GeneCards
PCDH7PCDH7BH-protocadherin (brain-heart)Source|GeneCards
ACTN1ACTN1actinin, alpha 1Source|GeneCards
DMDDMDdystrophin (muscular dystrophy, Duchenne and Becker types)Source|GeneCards
SMC4L1SMC4L1SMC4 structural maintenance of chromosomes 4-like 1 (yeast)Source|GeneCards
KIAA1374WDR56WD repeat domain 56Source|GeneCards
UBE2NUBE2Nubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast)Source|GeneCards
LOC145497LOC145497hypothetical protein LOC145497Source|GeneCards
RERGRERGRAS-like, estrogen-regulated, growth-inhibitorSource|GeneCards
GGNGGNgametogenetinSource|GeneCards
ACADSBACADSBacyl-Coenzyme A dehydrogenase, short/branched chainSource|GeneCards
LMO3LMO3LIM domain only 3 (rhombotin-like 2)Source|GeneCards
DLEU1DLEU1deleted in lymphocytic leukemia, 1Source|GeneCards
NOL4NOL4nucleolar protein 4Source|GeneCards
FLJ20716FAM70Afamily with sequence similarity 70, member ASource|GeneCards
TRIB1TRIB1tribbles homolog 1 (Drosophila)Source|GeneCards
DLEU2DLEU2deleted in lymphocytic leukemia, 2Source|GeneCards
NKX2-8NKX2-8NK2 transcription factor related, locus 8 (Drosophila)Source|GeneCards
ZNFN1A2ZNFN1A2zinc finger protein, subfamily 1A, 2 (Helios)Source|GeneCards
KCND3KCND3potassium voltage-gated channel, Shal-related subfamily, member 3Source|GeneCards
BHLHB5BHLHB5basic helix-loop-helix domain containing, class B, 5Source|GeneCards
CAMK1DCAMK1Dcalcium/calmodulin-dependent protein kinase IDSource|GeneCards
MAN1C1MAN1C1mannosidase, alpha, class 1C, member 1Source|GeneCards
TCF7L2TCF7L2transcription factor 7-like 2 (T-cell specific, HMG-box)Source|GeneCards
SSB1SSB1SPRY domain-containing SOCS box protein SSB-1Source|GeneCards
DKFZP564D172DKFZP564D172hypothetical protein DKFZp564D172Source|GeneCards
JMJD1CJMJD1Cjumonji domain containing 1CSource|GeneCards
ZNFN1A5ZNFN1A5zinc finger protein, subfamily 1A, 5Source|GeneCards
OA48-18
SUPT16HSUPT16Hsuppressor of Ty 16 homolog (S. cerevisiae)Source|GeneCards
PUM2PUM2pumilio homolog 2 (Drosophila)Source|GeneCards
OLFM2OLFM2olfactomedin 2Source|GeneCards
TAF5TAF5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDaSource|GeneCards
OSBPL7OSBPL7oxysterol binding protein-like 7Source|GeneCards
HOXD12HOXD12homeo box D12Source|GeneCards


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