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Gene set: V$ROAZ_01 (C3:TFAC:0250)
Standard nameV$ROAZ_01
Systematic nameC3:TFAC:0250
Brief descriptionGenes with 3'UTR containing motif GCACCCAWGGGTGM which matches annotation for ZNF423: zinc finger protein 423
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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FA Roaz
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SY rat Olf-1/EBF-associated zinc finger protein; ZFP104; zinc finger protein
SY 104.
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OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
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CL C0001; CH.
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SZ 1186 AA; 133.5 kDa (cDNA)
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SC SPTREMBL #O08961
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FT 21 45 zinc finger 1.
FT 21 43 PF00096; zf-C2H2.
FT 21 43 SM00355; ZnF_C2H2.
FT 49 73 zinc finger 2.
FT 49 71 SM00355; ZnF_C2H2.
FT 49 71 PF00096; zf-C2H2.
FT 77 101 zinc finger 3.
FT 77 99 SM00355; ZnF_C2H2.
FT 77 99 PF00096; zf-C2H2.
FT 105 129 zinc finger 4.
FT 105 127 SM00355; ZnF_C2H2.
FT 105 127 PF00096; zf-C2H2.
FT 146 171 zinc finger 5.
FT 146 169 SM00355; ZnF_C2H2.
FT 146 169 PF00096; zf-C2H2.
FT 178 203 zinc finger 6.
FT 178 201 SM00355; ZnF_C2H2.
FT 178 201 PF00096; zf-C2H2.
FT 206 230 zinc finger 7.
FT 206 228 SM00355; ZnF_C2H2.
FT 206 228 PF00096; zf-C2H2.
FT 240 492 O/E-1 interaction domain [2].
FT 311 337 zinc finger 8.
FT 311 335 SM00355; ZnF_C2H2.
FT 311 335 PF00096; zf-C2H2.
FT 342 368 zinc finger 9.
FT 343 366 SM00355; ZnF_C2H2.
FT 343 366 PF00096; zf-C2H2.
FT 354 391 helix-loop-helix domain [2].
FT 382 407 zinc finger 10.
FT 382 405 SM00355; ZnF_C2H2.
FT 382 405 PF00096; zf-C2H2.
FT 419 444 zinc finger 11.
FT 419 442 SM00355; ZnF_C2H2.
FT 419 442 PF00096; zf-C2H2.
FT 465 492 zinc finger 12.
FT 465 490 PF00096; zf-C2H2.
FT 465 490 SM00355; ZnF_C2H2.
FT 534 558 zinc finger 13.
FT 534 556 PF00096; zf-C2H2.
FT 534 556 SM00355; ZnF_C2H2.
FT 564 588 zinc finger 14.
FT 564 586 PF00096; zf-C2H2.
FT 564 586 SM00355; ZnF_C2H2.
FT 594 619 zinc finger 15.
FT 594 617 PF00096; zf-C2H2.
FT 594 617 SM00355; ZnF_C2H2.
FT 622 647 zinc finger 16.
FT 622 645 SM00355; ZnF_C2H2.
FT 622 645 PF00096; zf-C2H2.
FT 652 677 zinc finger 17.
FT 652 675 PF00096; zf-C2H2.
FT 652 675 SM00355; ZnF_C2H2.
FT 683 707 zinc finger 18.
FT 683 705 PF00096; zf-C2H2.
FT 683 705 SM00355; ZnF_C2H2.
FT 709 734 zinc finger 19.
FT 709 732 PF00096; zf-C2H2.
FT 709 732 SM00355; ZnF_C2H2.
FT 788 813 zinc finger 20.
FT 788 811 PF00096; zf-C2H2.
FT 788 811 SM00355; ZnF_C2H2.
FT 832 856 zinc finger 21.
FT 832 854 SM00355; ZnF_C2H2.
FT 832 854 PF00096; zf-C2H2.
FT 861 885 zinc finger 22.
FT 861 883 PF00096; zf-C2H2.
FT 861 883 SM00355; ZnF_C2H2.
FT 890 914 zinc finger 23.
FT 890 912 SM00355; ZnF_C2H2.
FT 922 946 zinc finger 24.
FT 922 944 SM00355; ZnF_C2H2.
FT 1022 1047 zinc finger 25.
FT 1022 1045 PF00096; zf-C2H2.
FT 1022 1045 SM00355; ZnF_C2H2.
FT 1070 1094 zinc finger 26.
FT 1070 1092 PF00096; zf-C2H2.
FT 1070 1092 SM00355; ZnF_C2H2.
FT 1100 1124 zinc finger 27.
FT 1100 1122 PF00096; zf-C2H2.
FT 1100 1122 SM00355; ZnF_C2H2.
FT 1131 1156 zinc finger 28.
FT 1131 1154 PF00096; zf-C2H2.
FT 1131 1154 SM00355; ZnF_C2H2.
FT 1161 1186 zinc finger 29.
FT 1161 1184 PF00096; zf-C2H2.
FT 1161 1184 SM00355; ZnF_C2H2.
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SF 29-zinc-finger (TFIIIA type) protein [2]
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CP (adult:) olfactory epithelium (basal cell layer, pseudostratified
CP epithelium), spleen, brain, eye heart [2]
CN (adult:) intestine, kidney, lung, liver, testis [2]
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FF interacts with EBF and represses EBF mediated transcriptional
FF activation [2];
FF plays a role in the coordination of olfactory sensory neuron
FF differentiation [2];
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IN T01112; COE1; mouse, Mus musculus.
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RN [1]; RE0013845.
RX MEDLINE; 98449934.
RA Tsai R. Y. L., Reed R. R.
RT Identification of DNA recognition sequences and protein interaction domains
RT of the multiple-Zn-finger protein Roaz
RL Mol. Cell. Biol. 18:6447-6456 (1998).
RN [2]; RE0016790.
RX MEDLINE; 97296548.
RA Tsai R. Y., Reed R. R.
RT Cloning and functional characterization of Roaz, a zinc finger protein that
RT interacts with O/E-1 to regulate gene expression: implications for
RT olfactory neuronal development.
RL J. Neurosci. 17:4159-4169 (1997).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

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