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Gene set: V$USF_Q6_01 (C3:TFAC:0389)
Standard nameV$USF_Q6_01
Systematic nameC3:TFAC:0389
Brief descriptionGenes with 3'UTR containing motif NRCCACGTGASN. Motif does not match any known transcription factor
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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FA USF-1:USF-2
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SY CIIIB1.
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OS rat, Rattus norvegicus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
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CL C0012; bHLH-ZIP.
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SF heterodimer;
SF for individual polypeptides see rat USF-1 and rat USF-2 ;
SF previously known nuclear activity CIIIB1 was identified with USF-1/USF-2
SF heterodimers [2];
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FF activator of apolipoprotein genes apoCIII and apoAII [3] [2] [1]
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RN [1]; RE0018051.
RX MEDLINE; 21964065.
RA Pastier D., Lacorte J.-M., Chambaz J., Cardot P., Ribeiro A.
RT Two initiator-like elements are required for the combined activation of the
RT human apolipoprotein C-III promoter by upstream stimulatory factor and
RT hepatic nuclear factor-4.
RL J. Biol. Chem. 277:15199-15206 (2002).
RN [2]; RE0016829.
RX MEDLINE; 99098855.
RA Ribeiro A., Pastier D., Kardassis D., Chambaz J., Cardot P.
RT Cooperative binding of upstream stimulatory factor and hepatic nuclear
RT factor 4 drives the transcription of the human apolipoprotein A-II gene.
RL J. Biol. Chem. 274:1216-1225 (1999).
RN [3]; RE0000992.
RX MEDLINE; 91236737.
RA Ogami K., Kardassis D., Cladaras C., Zannis V. I.
RT Purification and characterization of a heat stable nuclear factor CIIIB1
RT involved in the regulation of the human apoC-III gene
RL J. Biol. Chem. 266:9640-9646 (1991).
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Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

246 genes, 246 accessions (Toggle view)

AccessionGeneTitleLinks
TM4SF10TM4SF10transmembrane 4 superfamily member 10Source|GeneCards
LOC147727LOC147727hypothetical protein LOC147727Source|GeneCards
HEXAHEXAhexosaminidase A (alpha polypeptide)Source|GeneCards
GTF2H1GTF2H1general transcription factor IIH, polypeptide 1, 62kDaSource|GeneCards
LOC124842LOC124842hypothetical protein LOC124842Source|GeneCards
SSR1SSR1signal sequence receptor, alpha (translocon-associated protein alpha)Source|GeneCards
TRIM46TRIM46tripartite motif-containing 46Source|GeneCards
BDNFBDNFbrain-derived neurotrophic factorSource|GeneCards
RPS2RPS2ribosomal protein S2Source|GeneCards
C13ORF22C13ORF22chromosome 13 open reading frame 22Source|GeneCards
RGL2RGL2ral guanine nucleotide dissociation stimulator-like 2Source|GeneCards
RANBP1RANBP1RAN binding protein 1Source|GeneCards
ZNF318ZNF318zinc finger protein 318Source|GeneCards
AGRPAGRPagouti related protein homolog (mouse)Source|GeneCards
FLJ22578FLJ22578hypothetical protein FLJ22578Source|GeneCards
GNA13GNA13guanine nucleotide binding protein (G protein), alpha 13Source|GeneCards
NFX1NFX1nuclear transcription factor, X-box binding 1Source|GeneCards
ILF3ILF3interleukin enhancer binding factor 3, 90kDaSource|GeneCards
ARL3ARL3ADP-ribosylation factor-like 3Source|GeneCards
HNRPDLHNRPDLheterogeneous nuclear ribonucleoprotein D-likeSource|GeneCards
NR3C2NR3C2nuclear receptor subfamily 3, group C, member 2Source|GeneCards
LIN28LIN28lin-28 homolog (C. elegans)Source|GeneCards
UBXD3UBXD3UBX domain containing 3Source|GeneCards
HOXA3HOXA3homeo box A3Source|GeneCards
MYST3MYST3MYST histone acetyltransferase (monocytic leukemia) 3Source|GeneCards
COMMD3COMMD3COMM domain containing 3Source|GeneCards
WDR1WDR1WD repeat domain 1Source|GeneCards
AATFAATFapoptosis antagonizing transcription factorSource|GeneCards
ZNF364ZNF364zinc finger protein 364Source|GeneCards
FLJ14494RPUSD4RNA pseudouridylate synthase domain containing 4Source|GeneCards
FLJ20032FLJ20032hypothetical protein FLJ20032Source|GeneCards
HOXC12HOXC12homeo box C12Source|GeneCards
ARTNARTNarteminSource|GeneCards
ATP7BATP7BATPase, Cu++ transporting, beta polypeptide (Wilson disease)Source|GeneCards
WIPI49WIPI49WD40 repeat protein Interacting with phosphoInositides of 49kDaSource|GeneCards
VGFVGFVGF nerve growth factor inducibleSource|GeneCards
WFIKKNRPWFIKKN2WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2Source|GeneCards
EIF4G1EIF4G1eukaryotic translation initiation factor 4 gamma, 1Source|GeneCards
NEUROD2NEUROD2neurogenic differentiation 2Source|GeneCards
MRPL27MRPL27mitochondrial ribosomal protein L27Source|GeneCards
FLJ10330PRPF38BPRP38 pre-mRNA processing factor 38 (yeast) domain containing BSource|GeneCards
DUSP7DUSP7dual specificity phosphatase 7Source|GeneCards
LOC51233LOC51233hypothetical protein LOC51233Source|GeneCards
RAPGEF3RAPGEF3Rap guanine nucleotide exchange factor (GEF) 3Source|GeneCards
LTBRLTBRlymphotoxin beta receptor (TNFR superfamily, member 3)Source|GeneCards
PAI-RBP1SERBP1SERPINE1 mRNA binding protein 1Source|GeneCards
IGF2RIGF2Rinsulin-like growth factor 2 receptorSource|GeneCards
HOXC5HOXC5homeo box C5Source|GeneCards
FLJ32549FLJ32549hypothetical protein FLJ32549Source|GeneCards
HOXD10HOXD10homeo box D10Source|GeneCards
CHD4CHD4chromodomain helicase DNA binding protein 4Source|GeneCards
MGC35138C11ORF35chromosome 11 open reading frame 35Source|GeneCards
VLDLRVLDLRvery low density lipoprotein receptorSource|GeneCards
HTF9CHTF9CHpaII tiny fragments locus 9CSource|GeneCards
ETV1ETV1ets variant gene 1Source|GeneCards
RPL19RPL19ribosomal protein L19Source|GeneCards
TAC1TAC1tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma)Source|GeneCards
PANK3PANK3pantothenate kinase 3Source|GeneCards
GNB2GNB2guanine nucleotide binding protein (G protein), beta polypeptide 2Source|GeneCards
SEPT3SEPT3septin 3Source|GeneCards
TRIB1TRIB1tribbles homolog 1 (Drosophila)Source|GeneCards
UBE2BUBE2Bubiquitin-conjugating enzyme E2B (RAD6 homolog)Source|GeneCards
C9ORF77C9ORF77chromosome 9 open reading frame 77Source|GeneCards
PTMAPTMAprothymosin, alpha (gene sequence 28)Source|GeneCards
NRASNRASneuroblastoma RAS viral (v-ras) oncogene homologSource|GeneCards
RNF44RNF44ring finger protein 44Source|GeneCards
KCNE4KCNE4potassium voltage-gated channel, Isk-related family, member 4Source|GeneCards
HRH3HRH3histamine receptor H3Source|GeneCards
HIF1AHIF1Ahypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)Source|GeneCards
IPO7IPO7importin 7Source|GeneCards
AKAP12AKAP12A kinase (PRKA) anchor protein (gravin) 12Source|GeneCards
SLC43A1SLC43A1solute carrier family 43, member 1Source|GeneCards
KIAA1033KIAA1033KIAA1033 proteinSource|GeneCards
HOXA1HOXA1homeo box A1Source|GeneCards
TFAP4TFAP4transcription factor AP-4 (activating enhancer binding protein 4)Source|GeneCards
VPS16VPS16vacuolar protein sorting 16 (yeast)Source|GeneCards
TCF7TCF7transcription factor 7 (T-cell specific, HMG-box)Source|GeneCards
MAXMAXMAX proteinSource|GeneCards
SNTB2SNTB2syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)Source|GeneCards
CNOT4CNOT4CCR4-NOT transcription complex, subunit 4Source|GeneCards
C11ORF13RASSF7Ras association (RalGDS/AF-6) domain family 7Source|GeneCards
NDUFS1NDUFS1NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)Source|GeneCards
KCTD15KCTD15potassium channel tetramerisation domain containing 15Source|GeneCards
SPINLSPINLspinster-likeSource|GeneCards
C6ORF211C6ORF211chromosome 6 open reading frame 211Source|GeneCards
TMEM15TMEM15transmembrane protein 15Source|GeneCards
HMGN2HMGN2high-mobility group nucleosomal binding domain 2Source|GeneCards
EIF4EEIF4Eeukaryotic translation initiation factor 4ESource|GeneCards
KIAA0664KIAA0664KIAA0664 proteinSource|GeneCards
CCAR1CCAR1cell division cycle and apoptosis regulator 1Source|GeneCards
LISCH7LISCH7liver-specific bHLH-Zip transcription factorSource|GeneCards
BAXBAXBCL2-associated X proteinSource|GeneCards
MAP1DMAP1Dmethionine aminopeptidase 1DSource|GeneCards
PDP2PDP2pyruvate dehydrogenase phosphatase isoenzyme 2Source|GeneCards
SFXN2SFXN2sideroflexin 2Source|GeneCards
HOXB7HOXB7homeo box B7Source|GeneCards
EWSR1EWSR1Ewing sarcoma breakpoint region 1Source|GeneCards
RAB3IL1RAB3IL1RAB3A interacting protein (rabin3)-like 1Source|GeneCards
NEUROD1NEUROD1neurogenic differentiation 1Source|GeneCards
DLC2STARD13START domain containing 13Source|GeneCards
KLF4KLF4Kruppel-like factor 4 (gut)Source|GeneCards
CENTB5CENTB5centaurin, beta 5Source|GeneCards
GADD45GGADD45Ggrowth arrest and DNA-damage-inducible, gammaSource|GeneCards
BTBD5BTBD5BTB (POZ) domain containing 5Source|GeneCards
SYT13SYT13synaptotagmin XIIISource|GeneCards
PER1PER1period homolog 1 (Drosophila)Source|GeneCards
U5-116KDEFTUD2elongation factor Tu GTP binding domain containing 2Source|GeneCards
GYGGYGglycogeninSource|GeneCards
KBTBD2KBTBD2kelch repeat and BTB (POZ) domain containing 2Source|GeneCards
NTN2LNTN2Lnetrin 2-like (chicken)Source|GeneCards
EEF1B2EEF1B2eukaryotic translation elongation factor 1 beta 2Source|GeneCards
HOXB6HOXB6homeo box B6Source|GeneCards
KRTCAP2KRTCAP2keratinocyte associated protein 2Source|GeneCards
ELK1ELK1ELK1, member of ETS oncogene familySource|GeneCards
NPM1NPM1nucleophosmin (nucleolar phosphoprotein B23, numatrin)Source|GeneCards
IMP-1IMP-1IGF-II mRNA-binding protein 1Source|GeneCards
EN1EN1engrailed homolog 1Source|GeneCards
MGC20410MGC20410hypothetical protein BC012330Source|GeneCards
SLC16A1SLC16A1solute carrier family 16 (monocarboxylic acid transporters), member 1Source|GeneCards
POGKPOGKpogo transposable element with KRAB domainSource|GeneCards
PRKCL1PKN1protein kinase N1Source|GeneCards
ABRABRactive BCR-related geneSource|GeneCards
RAMP2RAMP2receptor (calcitonin) activity modifying protein 2Source|GeneCards
APEX1APEX1APEX nuclease (multifunctional DNA repair enzyme) 1Source|GeneCards
SC5DLSC5DLsterol-C5-desaturase (ERG3 delta-5-desaturase homolog, fungal)-likeSource|GeneCards
SIRT1SIRT1sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae)Source|GeneCards
MPV17MPV17MpV17 transgene, murine homolog, glomerulosclerosisSource|GeneCards
RHOQRHOQras homolog gene family, member QSource|GeneCards
ZNF167ZNF167zinc finger protein 167Source|GeneCards
GLAGLAgalactosidase, alphaSource|GeneCards
LOC389792
EIF3S9EIF3S9eukaryotic translation initiation factor 3, subunit 9 eta, 116kDaSource|GeneCards
DKFZP564O0463WDSOF1WD repeats and SOF1 domain containingSource|GeneCards
JUPJUPjunction plakoglobinSource|GeneCards
SMYD4SMYD4SET and MYND domain containing 4Source|GeneCards
HPS5HPS5Hermansky-Pudlak syndrome 5Source|GeneCards
FGF5FGF5fibroblast growth factor 5Source|GeneCards
DCTN4DCTN4dynactin 4 (p62)Source|GeneCards
FLJ20071DYMDymeclinSource|GeneCards
TGIF2TGIF2TGFB-induced factor 2 (TALE family homeobox)Source|GeneCards
FLJ12750VPS37Bvacuolar protein sorting 37B (yeast)Source|GeneCards
NSEP1NSEP1nuclease sensitive element binding protein 1Source|GeneCards
CSRP2BPCSRP2BPCSRP2 binding proteinSource|GeneCards
GPRGPRputative G protein coupled receptorSource|GeneCards
MCOLN1MCOLN1mucolipin 1Source|GeneCards
ANKRD12ANKRD12ankyrin repeat domain 12Source|GeneCards
ANKRD17ANKRD17ankyrin repeat domain 17Source|GeneCards
DIAPH1DIAPH1diaphanous homolog 1 (Drosophila)Source|GeneCards
C20ORF81C20ORF81chromosome 20 open reading frame 81Source|GeneCards
COPS7ACOPS7ACOP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)Source|GeneCards
STC2STC2stanniocalcin 2Source|GeneCards
SLC1A7SLC1A7solute carrier family 1 (glutamate transporter), member 7Source|GeneCards
C6ORF82C6ORF82chromosome 6 open reading frame 82Source|GeneCards
SGKSGKserum/glucocorticoid regulated kinaseSource|GeneCards
CAB45SDF4stromal cell derived factor 4Source|GeneCards
FGF14FGF14fibroblast growth factor 14Source|GeneCards
TAF6LTAF6LTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDaSource|GeneCards
FLJ40432FLJ40432hypothetical protein FLJ40432Source|GeneCards
GKGKGlycerol kinaseSource|GeneCards
PCDHA10PCDHA10protocadherin alpha 10Source|GeneCards
ZFXZFXzinc finger protein, X-linkedSource|GeneCards
C20ORF104PHF20PHD finger protein 20Source|GeneCards
GTF2A1GTF2A1general transcription factor IIA, 1, 19/37kDaSource|GeneCards
TFAP2CTFAP2Ctranscription factor AP-2 gamma (activating enhancer binding protein 2 gamma)Source|GeneCards
SLC31A2SLC31A2solute carrier family 31 (copper transporters), member 2Source|GeneCards
KIAA0423KIAA0423KIAA0423Source|GeneCards
SNFTSNFTJun dimerization protein p21SNFTSource|GeneCards
TLL1TLL1tolloid-like 1Source|GeneCards
SLC26A2SLC26A2solute carrier family 26 (sulfate transporter), member 2Source|GeneCards
APLNAPLNapelinSource|GeneCards
WBP2WBP2WW domain binding protein 2Source|GeneCards
WDR20WDR20WD repeat domain 20Source|GeneCards
SCHIP1SCHIP1schwannomin interacting protein 1Source|GeneCards
SNIPSNIPSNAP25-interacting proteinSource|GeneCards
STAF42TADA1Ltranscriptional adaptor 1 (HFI1 homolog, yeast)-likeSource|GeneCards
HMOX1HMOX1heme oxygenase (decycling) 1Source|GeneCards
HSPA9BHSPA9Bheat shock 70kDa protein 9B (mortalin-2)Source|GeneCards
SOCS5SOCS5suppressor of cytokine signaling 5Source|GeneCards
LOC153222LOC153222adult retina proteinSource|GeneCards
LZTS2LZTS2leucine zipper, putative tumor suppressor 2Source|GeneCards
GIT1GIT1G protein-coupled receptor kinase-interactor 1Source|GeneCards
FLJ90024FLJ90024fasting-inducible integral membrane protein TM6P1Source|GeneCards
LAMP1LAMP1lysosomal-associated membrane protein 1Source|GeneCards
TMP21TMED10transmembrane emp24-like trafficking protein 10 (yeast)Source|GeneCards
FLJ37794FLJ37794hypothetical protein FLJ37794Source|GeneCards
ATF7IPATF7IPactivating transcription factor 7 interacting proteinSource|GeneCards
RNF12RNF12ring finger protein 12Source|GeneCards
MGC33190ATXN7L4ataxin 7-like 4Source|GeneCards
GPR157GPR157G protein-coupled receptor 157Source|GeneCards
HOXC11HOXC11homeo box C11Source|GeneCards
UTP14CUTP14CUTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)Source|GeneCards
SPIBSPIBSpi-B transcription factor (Spi-1/PU.1 related)Source|GeneCards
PPM1APPM1Aprotein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoformSource|GeneCards
NR5A1NR5A1nuclear receptor subfamily 5, group A, member 1Source|GeneCards
C5ORF5C5ORF5chromosome 5 open reading frame 5Source|GeneCards
ATP6V1HATP6V1HATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit HSource|GeneCards
RNF127RNF127ring finger protein 127Source|GeneCards
MFHAS1MFHAS1malignant fibrous histiocytoma amplified sequence 1Source|GeneCards
MGC3040MGC3040hypothetical protein MGC3040Source|GeneCards
FLJ20345FLJ20345hypothetical protein FLJ20345Source|GeneCards
CLN3CLN3ceroid-lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)Source|GeneCards
SNNSNNstanninSource|GeneCards
WDR23WDR23WD repeat domain 23Source|GeneCards
N-PACN-PACcytokine-like nuclear factor n-pacSource|GeneCards
HNRPH3HNRPH3heterogeneous nuclear ribonucleoprotein H3 (2H9)Source|GeneCards
C4BC4Bcomplement component 4BSource|GeneCards
ACACAACACAacetyl-Coenzyme A carboxylase alphaSource|GeneCards
SYT3SYT3synaptotagmin IIISource|GeneCards
HNRPH2HNRPH2heterogeneous nuclear ribonucleoprotein H2 (H')Source|GeneCards
KIAA0478ZBTB40zinc finger and BTB domain containing 40Source|GeneCards
RAB31RAB31RAB31, member RAS oncogene familySource|GeneCards
ADAM10ADAM10a disintegrin and metalloproteinase domain 10Source|GeneCards
WEE1WEE1WEE1 homolog (S. pombe)Source|GeneCards
BHLHB3BHLHB3basic helix-loop-helix domain containing, class B, 3Source|GeneCards
IQGAP2IQGAP2IQ motif containing GTPase activating protein 2Source|GeneCards
HPGDHPGDhydroxyprostaglandin dehydrogenase 15-(NAD)Source|GeneCards
C14ORF58C14ORF58chromosome 14 open reading frame 58Source|GeneCards
PICALMPICALMphosphatidylinositol binding clathrin assembly proteinSource|GeneCards
EPB41L4BEPB41L4Berythrocyte membrane protein band 4.1 like 4BSource|GeneCards
HNRPDHNRPDheterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)Source|GeneCards
NICE-3C1ORF43chromosome 1 open reading frame 43Source|GeneCards
EIF5AEIF5Aeukaryotic translation initiation factor 5ASource|GeneCards
C9ORF156C9ORF156chromosome 9 open reading frame 156Source|GeneCards
LOC221091LOC221091similar to hypothetical proteinSource|GeneCards
EGLN2EGLN2egl nine homolog 2 (C. elegans)Source|GeneCards
MGC40368TCP11L2t-complex 11 (mouse) like 2Source|GeneCards
STX6STX6syntaxin 6Source|GeneCards
HOXA7HOXA7homeo box A7Source|GeneCards
IRS4IRS4insulin receptor substrate 4Source|GeneCards
NPTX1NPTX1neuronal pentraxin ISource|GeneCards
NCKIPSDNCKIPSDNCK interacting protein with SH3 domainSource|GeneCards
PFDN2PFDN2prefoldin 2Source|GeneCards
SIMPSIMPsource of immunodominant MHC-associated peptidesSource|GeneCards
CDH1CDH1cadherin 1, type 1, E-cadherin (epithelial)Source|GeneCards
STMN1STMN1stathmin 1/oncoprotein 18Source|GeneCards
HOXA9HOXA9homeo box A9Source|GeneCards
ELOVL3ELOVL3elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3Source|GeneCards
HA-1HA-1Minor histocompatibility antigen HA-1Source|GeneCards
DNMT3ADNMT3ADNA (cytosine-5-)-methyltransferase 3 alphaSource|GeneCards
CGNCGNcingulinSource|GeneCards
AXUD1AXUD1AXIN1 up-regulated 1Source|GeneCards
GNASGNASGNAS complex locusSource|GeneCards
HOOK2HOOK2hook homolog 2 (Drosophila)Source|GeneCards
MGC4399MGC4399mitochondrial carrier proteinSource|GeneCards
KIAA0863KIAA0863KIAA0863 proteinSource|GeneCards
MINKKCNE1potassium voltage-gated channel, Isk-related family, member 1Source|GeneCards


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