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Gene set: V$PAX4_04 (C3:TFAC:0201)
Standard nameV$PAX4_04
Systematic nameC3:TFAC:0201
Brief descriptionGenes with 3'UTR containing motif RAAAAWTANNNNNNNNNNNNNNNYCACNCC which matches annotation for PAX4: paired box gene 4
CategoryC3: Motif
Sub-categoryTFAC: Transfac
Full description or Abstract

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XX
XX
XX
FA Pax-4a
XX
SY PAX4; mPAX4; Pax-4; mPax-4.
XX
OS mouse, Mus musculus
OC eukaryota; animalia; metazoa; chordata; vertebrata; tetrapoda; mammalia;
OC eutheria; rodentia; myomorpha; muridae; murinae
XX
CL C0018; paired-homeo.
XX
SZ 349 AA; 38.0 kDa (cDNA); 38 kDa (SDS) [1]
XX
XX
SC translated from EMBL #AB010558
XX
FT 5 132 paired domain.
FT 5 129 PF00292; PAX.
FT 5 129 SM00351; PAX.
FT 169 228 homeo domain.
FT 170 232 SM00389; HOX.
FT 171 227 PF00046; homeobox.
FT 231 349 leucine-/proline-rich region (28/119).
FT 239 252 missing in splice variant Pax-4b.
FT 278 349 activation and repression domain [1].
FT 278 314 missing in splice variant Pax-4c.
XX
SF Pax-4 gene presumably exists as a single copy in the genome [3];
SF the activation domain seems to be E1A-responsive whereas the repression
SF domain is general active [1];
SF three splice variants found which were not named by the authors [4];
SF the C-terminal region (activation/repression domain) shows no significant
SF homology with any other known Pax gene [4];
XX
CP MIN6, betaTC and NIT-1 cells [3]; (embryo 9.5 days:) ventral spinal cord,
CP pancreas, (embryo 10.5 days:) dorsal pancreas, (embryo 11.0 days:) ventral
CP pancres, (newborn:) insulin-producing beta cells [5]
CN alphaTC cells [3]; (newborn:) pancreatic alpha and delta cells [5]
XX
FF homozygous knockout mice die after birth within 3 days showing growth
FF retardation and dehydration (apparently as a consequence of insulin
FF deficiency) [5];
FF differentiation of endocrine progenitors to beta and delta cells [5];
FF Pax-4 binds to islet hormone promoters (glucagon, insulin, somastatin) and
FF can act competitive to Pax-6 as a repressor [1] [2];
XX
XX
XX
XX
RN [1]; RE0014123.
RX MEDLINE; 20036785.
RA Fujitani Y., Kajimoto Y., Yasuda T., Matsuoka T. A., Kaneto H., Umayahara
RA Y., Fujita N., Watada H., Miyazaki J. I., Yamasaki Y., Hori M.
RT Identification of a portable repression domain and an E1A-responsive
RT activation domain in Pax4: a possible role of Pax4 as a transcriptional
RT repressor in the pancreas
RL Mol. Cell. Biol. 19:8281-8291 (1999).
RN [2]; RE0014138.
RX MEDLINE; 20036784.
RA Smith S. B., Ee H. C., Conners J. R., German M. S.
RT Paired-homeodomain transcription factor PAX4 acts as a transcriptional
RT repressor in early pancreatic development
RL Mol. Cell. Biol. 19:8272-8280 (1999).
RN [3]; RE0014120.
RX MEDLINE; 98102804.
RA Matsushita T., Yamaoka T., Otsuka S., Moritani M., Matsumoto T., Itakura M.
RT Molecular cloning of mouse paired-box-containing gene (Pax)-4 from an islet
RT beta cell line and deduced sequence of human Pax-4
RL Biochem. Biophys. Res. Commun. 242:176-180 (1998).
RN [4]; RE0014280.
RX MEDLINE; 98153815.
RA Inoue H., Nomiyama J., Nakai K., Matsutani A., Tanizawa Y., Oka Y.
RT Isolation of full-length cDNA of mouse PAX4 gene and identification of its
RT human homologue
RL Biochem. Biophys. Res. Commun. 243:628-633 (1998).
RN [5]; RE0006104.
RX MEDLINE; 97238684.
RA Sosa-Pineda B., Chowdhury K., Torres M., Oliver G., Gruss P.
RT The Pax4 gene is essential for differentiation of insulin-producing beta
RT cells in the mammalian pancreas
RL Nature 386:399-402 (1997).
RN [6]; RE0006130.
RX MEDLINE; 97305958.
RA St-Onge L., Sosa-Pineda B., Chowdhury K., Mansouri A., Gruss P.
RT Pax6 is required for differentiation of glucagon-producing alpha -cells in
RT mouse pancreas
RL Nature 387:406-409 (1997).
RN [7]; RE0004257.
RX MEDLINE; 92120664.
RA Walther C., Guenet J. L., Simon D., Deutsch U., Jostes B., Goulding M. D.,
RA Plachov D., Balling R., Gruss P.
RT Pax: a murine multigene family of paired box-containing genes
RL Genomics 11:424-434 (1991).
XX
Publication URLna
External linksna
Keywords & MeSH headingsna
OrganismHuman,Mouse,Rat,Dog
Contributed byBroad Institute
Source platformSeq_Accession
Downloadgrp|xml|map
Genes

224 genes, 224 accessions (Toggle view)

AccessionGeneTitleLinks
BTEB1KLF9Kruppel-like factor 9Source|GeneCards
JMJD2AJMJD2Ajumonji domain containing 2ASource|GeneCards
LMO4LMO4LIM domain only 4Source|GeneCards
RTN3RTN3reticulon 3Source|GeneCards
MRPL48MRPL48mitochondrial ribosomal protein L48Source|GeneCards
SOX4SOX4SRY (sex determining region Y)-box 4Source|GeneCards
MEIS1MEIS1Meis1, myeloid ecotropic viral integration site 1 homolog (mouse)Source|GeneCards
MGC46719LIX1LLix1 homolog (mouse) likeSource|GeneCards
C14ORF162C14ORF162chromosome 14 open reading frame 162Source|GeneCards
JPH4JPH4junctophilin 4Source|GeneCards
LMO3LMO3LIM domain only 3 (rhombotin-like 2)Source|GeneCards
BHC80PHF21APHD finger protein 21ASource|GeneCards
LOC83690LOC83690CocoaCrispSource|GeneCards
GSK3BGSK3Bglycogen synthase kinase 3 betaSource|GeneCards
NLKNLKnemo like kinaseSource|GeneCards
MNTMNTMAX binding proteinSource|GeneCards
PITX2PITX2paired-like homeodomain transcription factor 2Source|GeneCards
PIK3C2APIK3C2Aphosphoinositide-3-kinase, class 2, alpha polypeptideSource|GeneCards
ADCYAP1ADCYAP1adenylate cyclase activating polypeptide 1 (pituitary)Source|GeneCards
ERFERFEts2 repressor factorSource|GeneCards
LOC144747LOC144747hypothetical protein LOC144747Source|GeneCards
CRYZL1CRYZL1crystallin, zeta (quinone reductase)-like 1Source|GeneCards
FBXO11FBXO11F-box only protein 11Source|GeneCards
PPP1R10PPP1R10protein phosphatase 1, regulatory subunit 10Source|GeneCards
SUPT16HSUPT16Hsuppressor of Ty 16 homolog (S. cerevisiae)Source|GeneCards
C14ORF20TSSK4testis-specific serine kinase 4Source|GeneCards
FYFYDuffy blood groupSource|GeneCards
ERGERGv-ets erythroblastosis virus E26 oncogene like (avian)Source|GeneCards
WWP2WWP2Nedd-4-like ubiquitin-protein ligaseSource|GeneCards
STOML2STOML2stomatin (EPB72)-like 2Source|GeneCards
FLJ38615C15ORF26chromosome 15 open reading frame 26Source|GeneCards
SLC5A3SLC5A3solute carrier family 5 (inositol transporters), member 3Source|GeneCards
CCNG1CCNG1cyclin G1Source|GeneCards
MRPS18BMRPS18Bmitochondrial ribosomal protein S18BSource|GeneCards
MGC33864ARL6IP6ADP-ribosylation-like factor 6 interacting protein 6Source|GeneCards
WNT8BWNT8Bwingless-type MMTV integration site family, member 8BSource|GeneCards
FLJ26184C16ORF47chromosome 16 open reading frame 47Source|GeneCards
CLCCLCCharcot-Leyden crystal proteinSource|GeneCards
RAB10RAB10RAB10, member RAS oncogene familySource|GeneCards
VANGL1VANGL1vang-like 1 (van gogh, Drosophila)Source|GeneCards
ARID4AARID4AAT rich interactive domain 4A (RBP1-like)Source|GeneCards
FLJ35821FLJ35821hypothetical protein FLJ35821Source|GeneCards
GABRA1GABRA1gamma-aminobutyric acid (GABA) A receptor, alpha 1Source|GeneCards
SEMA3CSEMA3Csema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3CSource|GeneCards
EMP1EMP1epithelial membrane protein 1Source|GeneCards
TRPM3TRPM3transient receptor potential cation channel, subfamily M, member 3Source|GeneCards
TCF4TCF4Transcription factor 4Source|GeneCards
EB-1EB-1E2a-Pbx1-associated proteinSource|GeneCards
ABLIM1ABLIM1actin binding LIM protein 1Source|GeneCards
PLAG1PLAG1pleiomorphic adenoma gene 1Source|GeneCards
USP9XUSP9Xubiquitin specific protease 9, X-linked (fat facets-like, Drosophila)Source|GeneCards
RGS3RGS3regulator of G-protein signalling 3Source|GeneCards
ACMSDACMSDaminocarboxymuconate semialdehyde decarboxylaseSource|GeneCards
CHD4CHD4chromodomain helicase DNA binding protein 4Source|GeneCards
SIX4SIX4sine oculis homeobox homolog 4 (Drosophila)Source|GeneCards
NTRK2NTRK2neurotrophic tyrosine kinase, receptor, type 2Source|GeneCards
HLX1HLX1H2.0-like homeo box 1 (Drosophila)Source|GeneCards
PURAPURApurine-rich element binding protein ASource|GeneCards
ETV1ETV1ets variant gene 1Source|GeneCards
DICER1DICER1Dicer1, Dcr-1 homolog (Drosophila)Source|GeneCards
CDC42EP5CDC42EP5CDC42 effector protein (Rho GTPase binding) 5Source|GeneCards
MGC15912MGC15912hypothetical protein MGC15912Source|GeneCards
NLNNLNneurolysin (metallopeptidase M3 family)Source|GeneCards
POU3F3POU3F3POU domain, class 3, transcription factor 3Source|GeneCards
MEOX2MEOX2mesenchyme homeo box 2 (growth arrest-specific homeo box)Source|GeneCards
CROC4C1ORF61chromosome 1 open reading frame 61Source|GeneCards
NNATNNATneuronatinSource|GeneCards
MAP3K11MAP3K11mitogen-activated protein kinase kinase kinase 11Source|GeneCards
TNRC6TNRC6ATrinucleotide repeat containing 6ASource|GeneCards
HHIPHHIPhedgehog interacting proteinSource|GeneCards
KLF7KLF7Kruppel-like factor 7 (ubiquitous)Source|GeneCards
ZNFN1A1ZNFN1A1zinc finger protein, subfamily 1A, 1 (Ikaros)Source|GeneCards
DSCAMDSCAMDown syndrome cell adhesion moleculeSource|GeneCards
NFIBNFIBnuclear factor I/BSource|GeneCards
HOXD9HOXD9homeo box D9Source|GeneCards
EBF2EBF2early B-cell factor 2Source|GeneCards
UBE2BUBE2Bubiquitin-conjugating enzyme E2B (RAD6 homolog)Source|GeneCards
PHOX2BPHOX2Bpaired-like homeobox 2bSource|GeneCards
ZNFN1A2ZNFN1A2zinc finger protein, subfamily 1A, 2 (Helios)Source|GeneCards
NRASNRASneuroblastoma RAS viral (v-ras) oncogene homologSource|GeneCards
GRIA3GRIA3glutamate receptor, ionotrophic, AMPA 3Source|GeneCards
TGFB3TGFB3transforming growth factor, beta 3Source|GeneCards
HTCD37PRUNEPrune homolog (Drosophila)Source|GeneCards
ITGA3ITGA3integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)Source|GeneCards
NEDD4LNEDD4Lneural precursor cell expressed, developmentally down-regulated 4-likeSource|GeneCards
JARID2JARID2Jumonji, AT rich interactive domain 2Source|GeneCards
FLJ43965CCDC4coiled-coil domain containing 4Source|GeneCards
ANGPT2ANGPT2angiopoietin 2Source|GeneCards
AKAP12AKAP12A kinase (PRKA) anchor protein (gravin) 12Source|GeneCards
ZNF521ZNF521zinc finger protein 521Source|GeneCards
CAMK2DCAMK2Dcalcium/calmodulin-dependent protein kinase (CaM kinase) II deltaSource|GeneCards
GNAO1GNAO1guanine nucleotide binding protein (G protein), alpha activating activity polypeptide OSource|GeneCards
IDN3NIPBLNipped-B homolog (Drosophila)Source|GeneCards
CCNICCNIcyclin ISource|GeneCards
CNOT2CNOT2CCR4-NOT transcription complex, subunit 2Source|GeneCards
TIAF1TIAF1TGFB1-induced anti-apoptotic factor 1Source|GeneCards
RHBDL4RHBDL4rhomboid, veinlet-like 4 (Drosophila)Source|GeneCards
SIM1SIM1single-minded homolog 1 (Drosophila)Source|GeneCards
ZNF462ZNF462zinc finger protein 462Source|GeneCards
HOXB7HOXB7homeo box B7Source|GeneCards
CHCHD7CHCHD7coiled-coil-helix-coiled-coil-helix domain containing 7Source|GeneCards
CEPT1CEPT1choline/ethanolaminephosphotransferaseSource|GeneCards
R-SPONDINR-SPONDINR-spondin homolog (Xenopus laevis)Source|GeneCards
PDZRN4PDZRN4PDZ domain containing RING finger 4Source|GeneCards
ASB11ASB11ankyrin repeat and SOCS box-containing 11Source|GeneCards
HOXB8HOXB8homeo box B8Source|GeneCards
FLJ22386FLJ22386leucine zipper domain proteinSource|GeneCards
HNRPA0HNRPA0heterogeneous nuclear ribonucleoprotein A0Source|GeneCards
ZNF198ZNF198zinc finger protein 198Source|GeneCards
FLJ20449FLJ20449hypothetical protein FLJ20449Source|GeneCards
HOXB9HOXB9homeo box B9Source|GeneCards
SMAD6SMAD6SMAD, mothers against DPP homolog 6 (Drosophila)Source|GeneCards
ELMO3ELMO3engulfment and cell motility 3 (ced-12 homolog, C. elegans)Source|GeneCards
FOXP2FOXP2forkhead box P2Source|GeneCards
RAP2CRAP2CRAP2C, member of RAS oncogene familySource|GeneCards
RBMS3RBMS3RNA binding motif, single stranded interacting proteinSource|GeneCards
ELK1ELK1ELK1, member of ETS oncogene familySource|GeneCards
PAPPAPAPPApregnancy-associated plasma protein ASource|GeneCards
HOXB4HOXB4homeo box B4Source|GeneCards
STC1STC1stanniocalcin 1Source|GeneCards
FLJ36576CXORF42chromosome X open reading frame 42Source|GeneCards
SGTBSGTBsmall glutamine-rich tetratricopeptide repeat (TPR)-containing, betaSource|GeneCards
JDP2JDP2jun dimerization protein 2Source|GeneCards
CDH10CDH10cadherin 10, type 2 (T2-cadherin)Source|GeneCards
FLJ36812FLJ36812hypothetical protein FLJ36812Source|GeneCards
ZNF238ZNF238zinc finger protein 238Source|GeneCards
EN1EN1engrailed homolog 1Source|GeneCards
KBTBD5KBTBD5kelch repeat and BTB (POZ) domain containing 5Source|GeneCards
ZNF288ZBTB20zinc finger and BTB domain containing 20Source|GeneCards
PTPRCPTPRCprotein tyrosine phosphatase, receptor type, CSource|GeneCards
MTUS1MTUS1mitochondrial tumor suppressor 1Source|GeneCards
PHLDA3PHLDA3pleckstrin homology-like domain, family A, member 3Source|GeneCards
ZFHX1BZFHX1Bzinc finger homeobox 1bSource|GeneCards
C11ORF8C11ORF8chromosome 11 open reading frame 8Source|GeneCards
COL25A1COL25A1collagen, type XXV, alpha 1Source|GeneCards
UBTFUBTFupstream binding transcription factor, RNA polymerase ISource|GeneCards
MAP2K7MAP2K7mitogen-activated protein kinase kinase 7Source|GeneCards
SOCS1SOCS1suppressor of cytokine signaling 1Source|GeneCards
DBCCR1LFAM5Cfamily with sequence similarity 5, member CSource|GeneCards
FOXP3FOXP3forkhead box P3Source|GeneCards
SALL3SALL3sal-like 3 (Drosophila)Source|GeneCards
LOC51057LOC51057hypothetical protein LOC51057Source|GeneCards
UNQ6369ITIH5Linter-alpha (globulin) inhibitor H5-likeSource|GeneCards
LIMS1LIMS1LIM and senescent cell antigen-like domains 1Source|GeneCards
GAL3ST4GAL3ST4galactose-3-O-sulfotransferase 4Source|GeneCards
FLJ10460C15ORF25chromosome 15 open reading frame 25Source|GeneCards
PRKAG1PRKAG1protein kinase, AMP-activated, gamma 1 non-catalytic subunitSource|GeneCards
BCL6BCL6B-cell CLL/lymphoma 6 (zinc finger protein 51)Source|GeneCards
TBCCTBCCtubulin-specific chaperone cSource|GeneCards
ARRDC3ARRDC3arrestin domain containing 3Source|GeneCards
FLJ30058FLJ30058hypothetical protein FLJ30058Source|GeneCards
BACH2BACH2BTB and CNC homology 1, basic leucine zipper transcription factor 2Source|GeneCards
AUTS2AUTS2autism susceptibility candidate 2Source|GeneCards
MYLKMYLKmyosin, light polypeptide kinaseSource|GeneCards
C14ORF116CHES1checkpoint suppressor 1Source|GeneCards
C7ORF20C7ORF20chromosome 7 open reading frame 20Source|GeneCards
HAND2HAND2heart and neural crest derivatives expressed 2Source|GeneCards
MORF4L2MORF4L2mortality factor 4 like 2Source|GeneCards
PRRX2PRRX2paired related homeobox 2Source|GeneCards
SF3B5SF3B5splicing factor 3b, subunit 5, 10kDaSource|GeneCards
CHST11CHST11carbohydrate (chondroitin 4) sulfotransferase 11Source|GeneCards
ING3ING3inhibitor of growth family, member 3Source|GeneCards
FLJ42133FLJ42133Hypothetical FLJ42133Source|GeneCards
FGF14FGF14fibroblast growth factor 14Source|GeneCards
GPR135GPR135G protein-coupled receptor 135Source|GeneCards
FLJ45187FLJ45187FLJ45187 proteinSource|GeneCards
STAG2STAG2stromal antigen 2Source|GeneCards
MARCKSMARCKSmyristoylated alanine-rich protein kinase C substrateSource|GeneCards
M-RIPM-RIPmyosin phosphatase-Rho interacting proteinSource|GeneCards
KRTHA1KRTHA1keratin, hair, acidic, 1Source|GeneCards
FLJ20259FLJ20259FLJ20259 proteinSource|GeneCards
SDPRSDPRserum deprivation response (phosphatidylserine binding protein)Source|GeneCards
FLJ10159FLJ10159hypothetical protein FLJ10159Source|GeneCards
NFIXNFIXnuclear factor I/X (CCAAT-binding transcription factor)Source|GeneCards
POU4F2POU4F2POU domain, class 4, transcription factor 2Source|GeneCards
IGF1RIGF1Rinsulin-like growth factor 1 receptorSource|GeneCards
PDE1APDE1Aphosphodiesterase 1A, calmodulin-dependentSource|GeneCards
SLITRK1SLITRK1SLIT and NTRK-like family, member 1Source|GeneCards
KRTAP17-1KRTAP17-1keratin associated protein 17-1Source|GeneCards
EBFEBFearly B-cell factorSource|GeneCards
DKFZP566B183NECAP1adaptin-ear-binding coat-associated protein 1Source|GeneCards
WNT2WNT2wingless-type MMTV integration site family member 2Source|GeneCards
DMDDMDdystrophin (muscular dystrophy, Duchenne and Becker types)Source|GeneCards
IL8RAIL8RAInterleukin 8 receptor, alphaSource|GeneCards
ASXL2ASXL2additional sex combs like 2 (Drosophila)Source|GeneCards
PPAP2BPPAP2Bphosphatidic acid phosphatase type 2BSource|GeneCards
HOXA5HOXA5homeo box A5Source|GeneCards
HOXC11HOXC11homeo box C11Source|GeneCards
CALD1CALD1caldesmon 1Source|GeneCards
TCF12TCF12transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)Source|GeneCards
NKX2-2NKX2-2NK2 transcription factor related, locus 2 (Drosophila)Source|GeneCards
ROCK1ROCK1Rho-associated, coiled-coil containing protein kinase 1Source|GeneCards
MYT1MYT1myelin transcription factor 1Source|GeneCards
SMARCA1SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1Source|GeneCards
GARSGARSGlycyl-tRNA synthetaseSource|GeneCards
FLJ10986FLJ10986hypothetical protein FLJ10986Source|GeneCards
FLJ30634FLJ30634hypothetical protein FLJ30634Source|GeneCards
TARSHABI3BPABI gene family, member 3 (NESH) binding proteinSource|GeneCards
TIMELESSTIMELESStimeless homolog (Drosophila)Source|GeneCards
FOXP1FOXP1forkhead box P1Source|GeneCards
RFX3RFX3regulatory factor X, 3 (influences HLA class II expression)Source|GeneCards
ITSN1ITSN1intersectin 1 (SH3 domain protein)Source|GeneCards
KIAA0261KIAA0261KIAA0261Source|GeneCards
NICE-3C1ORF43chromosome 1 open reading frame 43Source|GeneCards
C5ORF13C5ORF13chromosome 5 open reading frame 13Source|GeneCards
LOC257106LOC257106hypothetical protein LOC257106Source|GeneCards
DUSP4DUSP4dual specificity phosphatase 4Source|GeneCards
SOX15SOX15SRY (sex determining region Y)-box 15Source|GeneCards
E2F1E2F1E2F transcription factor 1Source|GeneCards
MEF2CMEF2CMADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)Source|GeneCards
BCL11ABCL11AB-cell CLL/lymphoma 11A (zinc finger protein)Source|GeneCards
OTX2OTX2orthodenticle homolog 2 (Drosophila)Source|GeneCards
NHLH2NHLH2nescient helix loop helix 2Source|GeneCards
FLJ11280FAM63Afamily with sequence similarity 63, member ASource|GeneCards
ASXL1ASXL1additional sex combs like 1 (Drosophila)Source|GeneCards
OA48-18
HOXA9HOXA9homeo box A9Source|GeneCards
HA-1HA-1Minor histocompatibility antigen HA-1Source|GeneCards
CACNG2CACNG2calcium channel, voltage-dependent, gamma subunit 2Source|GeneCards
FLJ23153STEAP4STEAP family member 4Source|GeneCards
PPOXPPOXprotoporphyrinogen oxidaseSource|GeneCards
ITPR3ITPR3inositol 1,4,5-triphosphate receptor, type 3Source|GeneCards
MGC70857MGC70857similar to RIKEN cDNA C030006K11 geneSource|GeneCards
IMPDH2IMPDH2IMP (inosine monophosphate) dehydrogenase 2Source|GeneCards