| BGT08 home | Class topics | Computing | Data sets | Notes | Project | Refs & links |
Class-by-class schedule
Location: Most classes will be in 025 Old Chemistry, but a couple of demos etc will be in 208 and/or 389 CARL (in Genetics Department)
| Date | Place | Topic |
| 2/27 | 025 OC | Introduction |
| 3/1 | 025 OC | Strategies for expression analysis (Hollie's slides) |
| 3/6 | 208 CARL | Expression analysis methods and tools |
| 3/8 | 308 CARL | More methods and tools, commercial software |
| 3/13 | Spring break: no class | |
| 3/15 | Spring break: no class | |
| 3/20 | 025 OC | Basic analysis and statistics for expression data
Correlation, graphical data exploration, intro to regression Use of Matlab |
| 3/22 | 025 OC | Regression and statistical models Relationships between expression levels of genes; networks |
| 3/27 | 025 OC | Perspectives on clustering and discrimination |
| 3/29 | 025 OC | More on regression modelling: multiple regression Predictive relationships |
| 4/3 | 025 OC | Principal components and singular value/factor methods |
| 4/5 | 025 OC | Binary regressions for molecular phenotyping |
| 4/10 | 025 OC | More on binary regressions for molecular phenotyping, and applications in cancer |
| 4/17 | Project time | |
| 4/19 | Project time | |
| 5/1 | Final date to hand in project |