STA 278/BGT 208: Gene Expression Analysis
- Schedule -

Home Schedule Computing Data sets Notes Project Refs & links


Date   Place     Topic
1/12 120 North    First class: Introduction. Slides: biology and statistics
1/19 - No class: MLK Day
1/26 120 North    Genes, regulation, transcription & gene expression: Slides
2/2 120 North    Exploratory data analysis & modelling: Statistics notes and exploratory matlab code
   -- data, correlation, regression, multivariate structure (PCA/SVD), and exploration of expression data sets in matlab
2/9 120 North    Expression array biology, technologies & processing: Slides
2/16 120 North    Normal models, regressions, graphical modelling ideas Intro to graphs & networks
  D106 LSRC      4-5pm: Friedman seminar
2/23 120 North    Class/personal data sets & project, molecular phenotyping and discovery goals/approaches
3/1 120 North    Array data generation: Lab tour, data processing, exploration
3/8 - Spring break - No Class
3/15 130 North    Exploratory regression methods, Bayesian methods, factor approaches and examples (MW)
3/22 120 North    Examples of experimental and observational phenotyping studies (JN)
3/29 120 North    Class projects
4/5 120 North    Class projects
4/12 Class projects
4/19 Class projects
5/3 Final date to hand in project